(Q34273811)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22606317%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

title

Independent, rapid and targeted loss of highly repetitive DNA in natural and synthetic allopolyploids of Nicotiana tabacum (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22606317%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

1 reference

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22606317%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

Richard Nichols

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22606317%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

Jirí Macas

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22606317%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

Petr Novak

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22606317%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

Andrew R. Leitch

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22606317%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

author name string

Simon Renny-Byfield

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22606317%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

Michael Chester

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22606317%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

language of work or name

English

0 references

publication date

14 May 2012

1 reference

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1 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22606317%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

volume

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22606317%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

issue

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22606317%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

page(s)

e36963

1 reference

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Creative Commons Attribution 4.0 International

1 February 2020

copyright license

start time

14 May 2012

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

ImageQuant

object named as

Image Quant

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

cites work

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The origin of tobacco's T genome is traced to a particular lineage within Nicotiana tomentosiformis (Solanaceae).

6 July 2018

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Polyploidy and angiosperm diversification

6 July 2018

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Ancestral polyploidy in seed plants and angiosperms

6 July 2018

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Repetitive part of the banana (Musa acuminata) genome investigated by low-depth 454 sequencing

6 July 2018

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6 July 2018

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Developmental timing of DNA elimination following allopolyploidization in wheat.

6 July 2018

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Mobilization of retrotransposons in synthetic allotetraploid tobacco.

6 July 2018

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Order out of chaos in the hybrid plant nucleus

6 July 2018

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Genome evolution in allopolyploid wheat--a revolutionary reprogramming followed by gradual changes

6 July 2018

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Rapid chromosome evolution in recently formed polyploids in Tragopogon (Asteraceae).

6 July 2018

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Genomic plasticity and the diversity of polyploid plants

6 July 2018

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The ups and downs of genome size evolution in polyploid species of Nicotiana (Solanaceae).

6 July 2018

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Repetitive DNA in the pea (Pisum sativum L.) genome: comprehensive characterization using 454 sequencing and comparison to soybean and Medicago truncatula

6 July 2018

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Genomic changes in resynthesized Brassica napus and their effect on gene expression and phenotype

6 July 2018

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Concerted evolution of rDNA in recently formed Tragopogon allotetraploids is typically associated with an inverse correlation between gene copy number and expression

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3351487

Global repeat discovery and estimation of genomic copy number in a large, complex genome using a high-throughput 454 sequence survey

6 July 2018

1 reference

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Finely orchestrated movements: evolution of the ribosomal RNA genes

6 July 2018

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Highly efficient concerted evolution in the ribosomal DNA repeats: total rDNA repeat variation revealed by whole-genome shotgun sequence data

6 July 2018

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Mechanisms of genomic rearrangements and gene expression changes in plant polyploids

6 July 2018

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6 July 2018

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Genome sequencing in microfabricated high-density picolitre reactors

6 July 2018

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Sobo, a recently amplified satellite repeat of potato, and its implications for the origin of tandemly repeated sequences

6 July 2018

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Polyploidy and genome evolution in plants

6 July 2018

1 reference

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Rapid concerted evolution of nuclear ribosomal DNA in two Tragopogon allopolyploids of recent and recurrent origin

6 July 2018

1 reference

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Epigenetic phenomena and the evolution of plant allopolyploids

6 July 2018

1 reference

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Do the different parental 'heteromes' cause genomic shock in newly formed allopolyploids?

6 July 2018

1 reference

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Sequence elimination and cytosine methylation are rapid and reproducible responses of the genome to wide hybridization and allopolyploidy in wheat

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3351487

Genome evolution in polyploids

6 July 2018

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3351487

6 July 2018

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0036963

De novo evolution of satellite DNA on the rye B chromosome.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3351487

The large-scale genomic organization of repetitive DNA families at the telomeres of rye chromosomes

6 July 2018

1 reference

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6 July 2018

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A whole-genome snapshot of 454 sequences exposes the composition of the barley genome and provides evidence for parallel evolution of genome size in wheat and barley

6 July 2018

1 reference

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Rapid evolution of parental rDNA in a synthetic tobacco allotetraploid line

21 January 2018

1 reference

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A genetic appraisal of a new synthetic Nicotiana tabacum (Solanaceae) and the Kostoff synthetic tobacco.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0036963

Nomenclatural Changes and a New Sectional Classification in Nicotiana (Solanaceae)

21 January 2018

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Single integration and spread of a Copia-like sequence nested in rDNA intergenic spacers of Allium cernuum (Alliaceae).

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0036963

Comparative analysis of DNA methylation in tobacco heterochromatic sequences

21 January 2018

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0036963

Fall and rise of satellite repeats in allopolyploids of Nicotiana over c. 5 million years.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0036963

The first meiosis of resynthesized Brassica napus, a genome blender.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0036963

Intragenic Recombination Events and Evidence for Hybrid Speciation in Nicotiana (Solanaceae)

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0036963

Genomic characterisation and the detection of raspberry chromatin in polyploid Rubus

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0036963

Comparative genomics and repetitive sequence divergence in the species of diploidNicotianasection Alatae

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0036963

Organisation of the plant genome in chromosomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0036963

Phylogenetic analysis of Sorghum and related taxa using internal transcribed spacers of nuclear ribosomal DNA.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3351487

Differential impact of retrotransposon populations on the genome of allotetraploid tobacco (Nicotiana tabacum)

28 October 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0036963

Molecular cytogenetic analyses and phylogenetic studies in the Nicotiana section Tomentosae

21 January 2018

1 reference

12 December 2020

Gene conversion of ribosomal DNA in Nicotiana tabacum is associated with undermethylated, decondensed and probably active gene units

1 reference

12 December 2020

Next Generation Sequencing Reveals Genome Downsizing in Allotetraploid Nicotiana tabacum, Predominantly through the Elimination of Paternally Derived Repetitive DNAs

1 reference

12 December 2020

Alterations in subtelomeric tandem repeats during early stages of allopolyploidy in wheat

1 reference

12 December 2020

Preferential elimination of repeated DNA sequences from the paternal, Nicotiana tomentosiformis genome donor of a synthetic, allotetraploid tobacco

1 reference

12 December 2020

Elimination and rearrangement of parental rDNA in the allotetraploid Nicotiana tabacum

1 reference

12 December 2020

10.1371/JOURNAL.PONE.0036963

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22606317%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22606317%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

PubMed publication ID

22606317

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22606317%20AND%20SRC:MED&resulttype=core&format=json