(Q34279008)

1 August 2017

title

Towards the identification of protein complexes and functional modules by integrating PPI network and gene expression data (English)

1 reference

1 August 2017

1 reference

Min Li

1

1 reference

1 August 2017

Xuehong Wu

series ordinal

2

1 reference

1 August 2017

Jianxin Wang

series ordinal

3

1 reference

1 August 2017

Yi Pan

series ordinal

4

1 reference

1 August 2017

publication date

23 May 2012

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1 August 2017

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1 August 2017

volume

13

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1 August 2017

page(s)

109

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Creative Commons Attribution 2.0 Generic

1 August 2017

copyright license

start time

23 May 2012

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

1 reference

April 2022 Public Data File from Crossref

describes a project that uses

Cytoscape

object named as

Cytoscape

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

cites work

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A Fast Hierarchical Clustering Algorithm for Functional Modules Discovery in Protein Interaction Networks

6 July 2018

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Network integration meets network dynamics

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6 July 2018

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6 July 2018

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6 July 2018

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Linking gene expression and functional network data in human heart failure

6 July 2018

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A modular network model of aging

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Growing functional modules from a seed protein via integration of protein interaction and gene expression data

6 July 2018

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Integration of biological networks and gene expression data using Cytoscape

6 July 2018

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MicroRNA regulation of human protein protein interaction network

6 July 2018

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Revealing static and dynamic modular architecture of the eukaryotic protein interaction network

6 July 2018

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Modular organization of protein interaction networks

6 July 2018

1 reference

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Evaluation of clustering algorithms for protein-protein interaction networks

6 July 2018

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Integrated analysis of multiple data sources reveals modular structure of biological networks

6 July 2018

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Development and implementation of an algorithm for detection of protein complexes in large interaction networks

6 July 2018

1 reference

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Proteome survey reveals modularity of the yeast cell machinery

6 July 2018

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Regulation of NuA4 histone acetyltransferase activity in transcription and DNA repair by phosphorylation of histone H4.

6 July 2018

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Uncovering the overlapping community structure of complex networks in nature and society

6 July 2018

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Dynamic Complex Formation During the Yeast Cell Cycle

6 July 2018

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Evidence for dynamically organized modularity in the yeast protein-protein interaction network

6 July 2018

1 reference

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6 July 2018

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Functional modules by relating protein interaction networks and gene expression.

6 July 2018

1 reference

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6 July 2018

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BTG2 antiproliferative protein interacts with the human CCR4 complex existing in vivo in three cell-cycle-regulated forms

6 July 2018

1 reference

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An automated method for finding molecular complexes in large protein interaction networks

6 July 2018

1 reference

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Community structure in social and biological networks

6 July 2018

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6 July 2018

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Relating whole-genome expression data with protein-protein interactions

6 July 2018

1 reference

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6 July 2018

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Redundant roles for the TFIID and SAGA complexes in global transcription

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3434013

SGD: Saccharomyces Genome Database

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3434013

Protein complex prediction via cost-based clustering

6 July 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2F1471-2105-13-109

Logic of the yeast metabolic cycle: temporal compartmentalization of cellular processes.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2F1471-2105-13-109

Analysis of the role of TFIIE in transcriptional regulation through structure-function studies of the TFIIEbeta subunit

21 January 2018

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Crossref

https://api.crossref.org/works/10.1186%2F1471-2105-13-109

An ensemble framework for clustering protein-protein interaction networks.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3434013

Interaction graph mining for protein complexes using local clique merging.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3434013

CFinder: locating cliques and overlapping modules in biological networks

28 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22621308

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2105-13-109

1 reference

1 August 2017

DBLP publication ID

journals/bmcbi/LiWWP12

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

1 August 2017

1 reference