(Q34301646)

1 August 2017

Joint analysis of miRNA and mRNA expression data (English)

1 reference

1 August 2017

Angel Rubio

4

0 references

author name string

Ander Muniategui

series ordinal

1

1 reference

PubMed ID

22692086

1 August 2017

Jon Pey

series ordinal

2

1 reference

PubMed ID

22692086

1 August 2017

Francisco J Planes

series ordinal

3

1 reference

1 August 2017

12 June 2012

1 reference

Briefings in Bioinformatics

1 August 2017

1 reference

1 August 2017

14

1 reference

1 August 2017

263-278

1 reference

1 August 2017

3

1 reference

miRBase: integrating microRNA annotation and deep-sequencing data

1 August 2017

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

Illuminating the silence: understanding the structure and function of small RNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

Biogenesis of small RNAs in animals

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

Switching from repression to activation: microRNAs can up-regulate translation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

Gene regulation by transcription factors and microRNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

Biological principles of microRNA-mediated regulation: shared themes amid diversity

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

Regulation of mRNA translation and stability by microRNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

RNA regulation: a new genetics?

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

Gene silencing by microRNAs: contributions of translational repression and mRNA decay

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

Mammalian microRNAs predominantly act to decrease target mRNA levels

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

The evolution of gene regulation by transcription factors and microRNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

Mechanisms of microRNA-mediated gene regulation in animal cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

The roles of microRNA in cancer and apoptosis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

MicroRNA functions in animal development and human disease

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

Non-coding RNAs: regulators of disease

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

MicroRNA signatures in human cancers

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

Pharmacological potential of RNAi--focus on miRNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

Biological functions of microRNAs: a review

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

Identification of hematopoietic stem cell-specific miRNAs enables gene therapy of globoid cell leukodystrophy

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

Exploiting and antagonizing microRNA regulation for therapeutic and experimental applications

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

Anti-miRNA oligonucleotides (AMOs): ammunition to target miRNAs implicated in human disease?

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

Silencing of microRNAs in vivo with 'antagomirs'

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

MicroRNA sponges: competitive inhibitors of small RNAs in mammalian cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

Experimental validation of miRNA targets

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

Strategies to identify microRNA targets: new advances

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

Practical Aspects of microRNA Target Prediction

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

Experimental identification of microRNA targets.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

Desperately seeking microRNA targets

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

MicroRNAs--targeting and target prediction

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

Prediction of microRNA targets

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

The microRNA.org resource: targets and expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

miRBase: tools for microRNA genomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

MicroRNA targeting specificity in mammals: determinants beyond seed pairing

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

Most mammalian mRNAs are conserved targets of microRNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

DIANA-microT web server: elucidating microRNA functions through target prediction

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

Combinatorial microRNA target predictions

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

Lost in translation: an assessment and perspective for computational microRNA target identification

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

Prediction and validation of microRNAs and their targets

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

The database of experimentally supported targets: a functional update of TarBase

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

miRecords: an integrated resource for microRNA-target interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

miRTarBase: a database curates experimentally validated microRNA-target interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

miRNAMap: genomic maps of microRNA genes and their target genes in mammalian genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

Using expression profiling data to identify human microRNA targets

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

HOCTAR database: a unique resource for microRNA target prediction

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

MAGIA, a web-based tool for miRNA and Genes Integrated Analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

A probabilistic framework to improve microrna target prediction by incorporating proteomics data

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

Integrative analysis of next generation sequencing for small non-coding RNAs and transcriptional regulation in Myelodysplastic Syndromes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

Identification of microRNAs with regulatory potential using a matched microRNA-mRNA time-course data

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

GeneCodis: interpreting gene lists through enrichment analysis and integration of diverse biological information

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

GENECODIS: a web-based tool for finding significant concurrent annotations in gene lists

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

PGC-1alpha-responsive genes involved in oxidative phosphorylation are coordinately downregulated in human diabetes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

MicroRNA and mRNA integrated analysis (MMIA): a web tool for examining biological functions of microRNA expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

Identifying mRNA targets of microRNA dysregulated in cancer: with application to clear cell Renal Cell Carcinoma

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

Integrated miRNA and mRNA expression profiling of the inflammatory breast cancer subtype

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

Characterization of B- and T-lineage acute lymphoblastic leukemia by integrated analysis of MicroRNA and mRNA expression profiles.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

Correlation of microRNA levels during hypoxia with predicted target mRNAs through genome-wide microarray analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

Integrated miRNA and mRNA expression profiling of mouse mammary tumor models identifies miRNA signatures associated with mammary tumor lineage

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

Correlation of expression profiles between microRNAs and mRNA targets using NCI-60 data

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

miRGator v2.0: an integrated system for functional investigation of microRNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

MicroRNA target prediction by expression analysis of host genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

Increasing MicroRNA target prediction confidence by the relative R(2) method

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

Modeling microRNA-mRNA interactions using PLS regression in human colon cancer

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

A variable selection method for genome-wide association studies.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

Quantification of miRNA-mRNA interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

Identification of microRNA expression patterns and definition of a microRNA/mRNA regulatory network in distinct molecular groups of multiple myeloma.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

Deregulation of microRNA expression in the different genetic subtypes of multiple myeloma and correlation with gene expression profiling.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

MicroRNA expression profiles classify human cancers

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

Multiclass cancer diagnosis using tumor gene expression signatures

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

CellMiner: a relational database and query tool for the NCI-60 cancer cell lines

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

Identifying functional miRNA-mRNA regulatory modules with correspondence latent dirichlet allocation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

Prediction of regulatory modules comprising microRNAs and target genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

Discovering transcriptional modules by Bayesian data integration

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

Identification of microRNA-mRNA modules using microarray data.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

Discovery of microRNA-mRNA modules via population-based probabilistic learning.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

Discovery of functional miRNA-mRNA regulatory modules with computational methods

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBS028

21 January 2018

Identifiers

DOI

10.1093/BIB/BBS028

1 reference

journals/bib/MuniateguiPPR13

1 August 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

PubMed ID

22692086