(Q34312943)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25120265%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

title

COMET: adaptive context-based modeling for ultrafast HIV-1 subtype identification (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25120265%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25120265%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

4

Jean-Claude Schmit

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25120265%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

author name string

Daniel Struck

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25120265%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

Anne-Marie Ternes

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25120265%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

Danielle Perez Bercoff

series ordinal

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25120265%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

language of work or name

English

0 references

publication date

12 August 2014

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25120265%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

published in

Nucleic Acids Research

1 reference

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12 March 2020

volume

42

1 reference

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12 March 2020

issue

18

1 reference

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12 March 2020

page(s)

e144

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25120265%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution-NonCommercial 4.0 International

12 March 2020

copyright license

start time

11 November 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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6 July 2018

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HIV-1 subtype distribution and its demographic determinants in newly diagnosed patients in Europe suggest highly compartmentalized epidemics

6 July 2018

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One size does not fit all: on how Markov model order dictates performance of genomic sequence analyses

6 July 2018

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HIV-1 subtype is an independent predictor of reverse transcriptase mutation K65R in HIV-1 patients treated with combination antiretroviral therapy including tenofovir

6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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Search and clustering orders of magnitude faster than BLAST

6 July 2018

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MS4--Multi-Scale Selector of Sequence Signatures: an alignment-free method for classification of biological sequences

6 July 2018

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The role of recombination in the emergence of a complex and dynamic HIV epidemic

6 July 2018

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An evolutionary model-based algorithm for accurate phylogenetic breakpoint mapping and subtype prediction in HIV-1

6 July 2018

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Reliability of rapid subtyping tools compared to that of phylogenetic analysis for characterization of human immunodeficiency virus type 1 non-B subtypes and recombinant forms

6 July 2018

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Identifying the important HIV-1 recombination breakpoints.

6 July 2018

1 reference

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The challenge of HIV-1 subtype diversity

6 July 2018

1 reference

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Effect of human immunodeficiency virus Type 1 (HIV-1) subtype on disease progression in persons from Rakai, Uganda, with incident HIV-1 infection

6 July 2018

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Compression-based classification of biological sequences and structures via the Universal Similarity Metric: experimental assessment

6 July 2018

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Comparing sequences without using alignments: application to HIV/SIV subtyping

6 July 2018

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Sequence determinants of breakpoint location during HIV-1 intersubtype recombination.

6 July 2018

1 reference

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A jumping profile Hidden Markov Model and applications to recombination sites in HIV and HCV genomes

6 July 2018

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Automatic assessment of alignment quality

6 July 2018

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6 July 2018

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6 July 2018

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Alignment-free sequence comparison-a review

6 July 2018

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Effect of human immunodeficiency virus (HIV) type 1 envelope subtypes A and D on disease progression in a large cohort of HIV-1-positive persons in Uganda

6 July 2018

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Human immunodeficiency virus type 1 subtypes differ in disease progression

6 July 2018

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6 July 2018

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6 July 2018

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Different rates of disease progression of HIV type 1 infection in Tanzania based on infecting subtype

21 January 2018

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No difference in clinical progression between patients infected with the predominant human immunodeficiency virus type 1 circulating recombinant form (CRF) 02_AG strain and patients not infected with CRF02_AG, in Western and West-Central Africa: a f

21 January 2018

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Impact of HIV type 1 genetic subtype on the outcome of antiretroviral therapy

21 January 2018

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Effect of HIV-1 subtype on virologic and immunologic response to starting highly active antiretroviral therapy.

21 January 2018

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Impact of human immunodeficiency virus type 1 subtypes on virologic response and emergence of drug resistance among children in the Paediatric European Network for Treatment of AIDS (PENTA) 5 trial

21 January 2018

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Increasing Prevalence of HIV‐1 Subtype A in Greece: Estimating Epidemic History and Origin

21 January 2018

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Assessment of automated genotyping protocols as tools for surveillance of HIV-1 genetic diversity

21 January 2018

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A statistical model for HIV-1 sequence classification using the subtype analyser (STAR).

21 January 2018

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Clustering by Compression

21 January 2018

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Data Compression Using Adaptive Coding and Partial String Matching

21 January 2018

1 reference

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21 January 2018

Identifiers

DOI

10.1093/NAR/GKU739

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25120265%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25120265%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

PubMed publication ID

25120265

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25120265%20AND%20SRC:MED&resulttype=core&format=json