(Q34314401)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23193294%20AND%20SRC:MED&resulttype=core&format=json

19 February 2020

title

CTCFBSDB 2.0: a database for CTCF-binding sites and genome organization (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23193294%20AND%20SRC:MED&resulttype=core&format=json

19 February 2020

0 references

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23193294%20AND%20SRC:MED&resulttype=core&format=json

19 February 2020

author name string

Jesse D Ziebarth

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23193294%20AND%20SRC:MED&resulttype=core&format=json

19 February 2020

Anindya Bhattacharya

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23193294%20AND%20SRC:MED&resulttype=core&format=json

19 February 2020

language of work or name

English

0 references

publication date

27 November 2012

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23193294%20AND%20SRC:MED&resulttype=core&format=json

19 February 2020

published in

Nucleic Acids Research

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23193294%20AND%20SRC:MED&resulttype=core&format=json

19 February 2020

volume

41

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23193294%20AND%20SRC:MED&resulttype=core&format=json

19 February 2020

page(s)

D188-94

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23193294%20AND%20SRC:MED&resulttype=core&format=json

19 February 2020

issue

Database issue

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23193294%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution-NonCommercial 3.0 Unported

19 February 2020

copyright license

start time

4 October 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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6 July 2018

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6 July 2018

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Waves of retrotransposon expansion remodel genome organization and CTCF binding in multiple mammalian lineages

6 July 2018

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6 July 2018

1 reference

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CTCF-promoted RNA polymerase II pausing links DNA methylation to splicing

6 July 2018

1 reference

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CTCF-mediated functional chromatin interactome in pluripotent cells

6 July 2018

1 reference

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Genome-wide CTCF distribution in vertebrates defines equivalent sites that aid the identification of disease-associated genes.

6 July 2018

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A user's guide to the encyclopedia of DNA elements (ENCODE)

6 July 2018

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High-resolution genome-wide in vivo footprinting of diverse transcription factors in human cells

6 July 2018

1 reference

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Intra- and inter-chromosomal interactions correlate with CTCF binding genome wide.

6 July 2018

1 reference

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Cell type specificity of chromatin organization mediated by CTCF and cohesin.

6 July 2018

1 reference

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Does CTCF mediate between nuclear organization and gene expression?

6 July 2018

1 reference

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CTCF binding site classes exhibit distinct evolutionary, genomic, epigenomic and transcriptomic features.

6 July 2018

1 reference

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Comprehensive mapping of long-range interactions reveals folding principles of the human genome

6 July 2018

1 reference

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CTCF: master weaver of the genome

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531215

Global analysis of the insulator binding protein CTCF in chromatin barrier regions reveals demarcation of active and repressive domains

6 July 2018

1 reference

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Genome-wide identification of in vivo protein-DNA binding sites from ChIP-Seq data

6 July 2018

1 reference

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Integration of external signaling pathways with the core transcriptional network in embryonic stem cells

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531215

CTCF physically links cohesin to chromatin

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531215

Cohesin mediates transcriptional insulation by CCCTC-binding factor

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531215

CTCFBSDB: a CTCF-binding site database for characterization of vertebrate genomic insulators

6 July 2018

1 reference

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High-resolution profiling of histone methylations in the human genome

6 July 2018

1 reference

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Systematic discovery of regulatory motifs in conserved regions of the human genome, including thousands of CTCF insulator sites

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531215

Analysis of the vertebrate insulator protein CTCF-binding sites in the human genome

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531215

NestedMICA: sensitive inference of over-represented motifs in nucleic acid sequence

6 July 2018

1 reference

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The ENCODE (ENCyclopedia Of DNA Elements) Project

6 July 2018

1 reference

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The binding sites for the chromatin insulator protein CTCF map to DNA methylation-free domains genome-wide

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531215

A gene atlas of the mouse and human protein-encoding transcriptomes

6 July 2018

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6 July 2018

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CTCF is a uniquely versatile transcription regulator linked to epigenetics and disease

6 July 2018

1 reference

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Methylation of a CTCF-dependent boundary controls imprinted expression of the Igf2 gene

6 July 2018

1 reference

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An exceptionally conserved transcriptional repressor, CTCF, employs different combinations of zinc fingers to bind diverged promoter sequences of avian and mammalian c-myc oncogenes

6 July 2018

1 reference

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A novel sequence-specific DNA binding protein which interacts with three regularly spaced direct repeats of the CCCTC-motif in the 5'-flanking sequence of the chicken c-myc gene

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531215

Transposable elements have rewired the core regulatory network of human embryonic stem cells

6 July 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKS1165

21 January 2018

Identifiers

DOI

10.1093/NAR/GKS1165

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23193294%20AND%20SRC:MED&resulttype=core&format=json

journals/nar/ZiebarthBC13

19 February 2020

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23193294%20AND%20SRC:MED&resulttype=core&format=json

19 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23193294%20AND%20SRC:MED&resulttype=core&format=json