(Q34321194)

1 August 2017

title

Comparative genomics defines the core genome of the growing N4-like phage genus and identifies N4-like Roseophage specific genes (English)

1 reference

1 August 2017

1 reference

Hendrik Schäfer

4

0 references

author name string

Jacqueline Z-M Chan

series ordinal

1

1 reference

1 August 2017

Andrew D Millard

series ordinal

2

1 reference

1 August 2017

Nicholas H Mann

series ordinal

3

1 reference

1 August 2017

publication date

10 October 2014

1 reference

Frontiers in Microbiology

1 August 2017

published in

1 reference

1 August 2017

volume

5

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1 August 2017

page(s)

506

1 reference

First genome sequences of Achromobacter phages reveal new members of the N4 family

1 August 2017

cites work

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6 July 2018

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Complete Genome of Acinetobacter baumannii N4-Like Podophage Presley

6 July 2018

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The complete genome sequence of EC1-UPM, a novel N4-like bacteriophage that infects Escherichia coli O78:K80

6 July 2018

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Genomic characterization provides new insight into Salmonella phage diversity

6 July 2018

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Whole genome sequencing and comparative genomic analyses of two Vibrio cholerae O139 Bengal-specific Podoviruses to other N4-like phages reveal extensive genetic diversity

6 July 2018

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6 July 2018

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6 July 2018

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A bioinformatic analysis of ribonucleotide reductase genes in phage genomes and metagenomes

6 July 2018

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Genomes of marine cyanopodoviruses reveal multiple origins of diversity.

6 July 2018

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Complete genome sequence of IME11, a new N4-like bacteriophage

6 July 2018

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Complete genome sequence of the bacteriophages ECBP1 and ECBP2 isolated from two different Escherichia coli strains

6 July 2018

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Complete genome of Pseudomonas aeruginosa phage PA26.

6 July 2018

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Isolation and characterization of a novel indigenous intestinal N4-related coliphage vB_EcoP_G7C.

6 July 2018

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Novel virulent and broad-host-range Erwinia amylovora bacteriophages reveal a high degree of mosaicism and a relationship to Enterobacteriaceae phages

6 July 2018

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6 July 2018

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T4 genes in the marine ecosystem: studies of the T4-like cyanophages and their role in marine ecology

6 July 2018

1 reference

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Genomic analysis of oceanic cyanobacterial myoviruses compared with T4-like myoviruses from diverse hosts and environments

6 July 2018

1 reference

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Molecular and physiological analysis of three Pseudomonas aeruginosa phages belonging to the "N4-like viruses".

6 July 2018

1 reference

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Genome sequences of two novel phages infecting marine roseobacters

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4193335

Roseophage RDJL Phi1, infecting the aerobic anoxygenic phototrophic bacterium Roseobacter denitrificans OCh114.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4193335

The immense journey of bacteriophage T4--from d'Hérelle to Delbrück and then to Darwin and beyond

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4193335

Insight into DNA and protein transport in double-stranded DNA viruses: the structure of bacteriophage N4.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4193335

Velvet: algorithms for de novo short read assembly using de Bruijn graphs

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4193335

Marine viruses--major players in the global ecosystem

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4193335

MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) Software Version 4.0

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4193335

The Sorcerer II Global Ocean Sampling expedition: northwest Atlantic through eastern tropical Pacific

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4193335

Minimus: a fast, lightweight genome assembler

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4193335

The marine viromes of four oceanic regions

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4193335

Overview of the marine roseobacter lineage

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4193335

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4193335

Marine phage genomics: what have we learned?

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4193335

Here a virus, there a virus, everywhere the same virus?

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4193335

Three Prochlorococcus cyanophage genomes: signature features and ecological interpretations

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4193335

Environmental genome shotgun sequencing of the Sargasso Sea

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4193335

Are viruses driving microbial diversification and diversity?

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4193335

Silicibacter pomeroyi sp. nov. and Roseovarius nubinhibens sp. nov., dimethylsulfoniopropionate-demethylating bacteria from marine environments.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4193335

OrthoMCL: Identification of Ortholog Groups for Eukaryotic Genomes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4193335

Cyanophages infecting the oceanic cyanobacterium Prochlorococcus

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4193335

The complete sequence of marine bacteriophage VpV262 infecting vibrio parahaemolyticus indicates that an ancestral component of a T7 viral supergroup is widespread in the marine environment

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4193335

6 July 2018

Global phage diversity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4193335

N4 RNA polymerase II, a heterodimeric RNA polymerase with homology to the single-subunit family of RNA polymerases

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4193335

Complete nucleotide sequence, molecular analysis and genome structure of bacteriophage A118 of Listeria monocytogenes: implications for phage evolution

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4193335

Improved microbial gene identification with GLIMMER

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4193335

Heuristic approach to deriving models for gene finding

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4193335

Marine viruses and their biogeochemical and ecological effects

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4193335

Evolutionary relationships among diverse bacteriophages and prophages: all the world's a phage

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4193335

The neighbor-joining method: a new method for reconstructing phylogenetic trees

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4193335

Escherichia coli thioredoxin stabilizes complexes of bacteriophage T7 DNA polymerase and primed templates

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4193335

Thioredoxin and glutaredoxin systems

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4193335

Basic local alignment search tool

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4193335

Position paper: the creation of a rational scheme for the nomenclature of viruses of Bacteria and Archaea

6 July 2018

1 reference

https://api.crossref.org/works/10.3389%2FFMICB.2014.00506

Comparative genomics of marine cyanomyoviruses reveals the widespread occurrence of Synechococcus host genes localized to a hyperplastic region: implications for mechanisms of cyanophage evolution.

21 January 2018

1 reference

https://api.crossref.org/works/10.3389%2FFMICB.2014.00506

Viruses and Nutrient Cycles in the Sea

21 January 2018

1 reference

https://api.crossref.org/works/10.3389%2FFMICB.2014.00506

Evolutionary Divergence and Convergence in Proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.3389%2FFMICB.2014.00506

Exploring the Vast Diversity of Marine Viruses

21 January 2018

1 reference

https://api.crossref.org/works/10.3389%2FFMICB.2014.00506

Evidence for the presence of a CmuA methyltransferase pathway in novel marine methyl halide-oxidizing bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.3389%2FFMICB.2014.00506

Confidence Limits on Phylogenies: an Approach using the Bootstrap

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25346726

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.3389/FMICB.2014.00506

1 reference

1 August 2017

1 reference

1 August 2017

1 reference