(Q34324713)

1 August 2017

title

Efficient error correction for next-generation sequencing of viral amplicons (English)

1 reference

1 August 2017

1 reference

Alex Zelikovsky

8

1 reference

ORCID Public Data File 2021

Gilberto Vaughan

4

object named as

Gilberto Vaughan

1 reference

1 August 2017

Pavel Skums

1

1 reference

1 August 2017

Zoya Dimitrova

2

1 reference

1 August 2017

David S Campo

3

1 reference

1 August 2017

Livia Rossi

5

1 reference

1 August 2017

Joseph C Forbi

6

1 reference

1 August 2017

Jonny Yokosawa

7

1 reference

1 August 2017

Yury Khudyakov

9

1 reference

1 August 2017

publication date

25 June 2012

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1 August 2017

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1 August 2017

volume

13 Suppl 10

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1 August 2017

page(s)

S6

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Creative Commons Attribution 2.0 Generic

1 August 2017

copyright license

start time

1 June 2012

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

exact match

https://scigraph.springernature.com/pub.10.1186/1471-2105-13-s10-s6

0 references

cites work

Accuracy and quality assessment of 454 GS-FLX Titanium pyrosequencing.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382444

ShoRAH: estimating the genetic diversity of a mixed sample from next-generation sequencing data

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382444

EDAR: an efficient error detection and removal algorithm for next generation sequencing data

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382444

Error correction of next-generation sequencing data and reliable estimation of HIV quasispecies

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382444

Hepatitis C virus transmission bottlenecks analyzed by deep sequencing.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382444

Accurate determination of microbial diversity from 454 pyrosequencing data

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382444

Short read fragment assembly of bacterial genomes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382444

Clustal W and Clustal X version 2.0

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382444

Epidemiology of hepatitis C virus infection

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382444

Genetic diversity and evolution of hepatitis C virus--15 years on

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382444

Hepatitis C virus clearance: the enigma of failure despite an impeccable survival strategy

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382444

The hepatitis C virus persistence: how to evade the immune system?

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382444

An Eulerian path approach to DNA fragment assembly

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382444

Sequence evolution of the hypervariable region in the putative envelope region E2/NS1 of hepatitis C virus is correlated with specific humoral immune responses

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382444

Isolation of a cDNA clone derived from a blood-borne non-A, non-B viral hepatitis genome

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382444

Correcting errors in short reads by multiple alignments

6 July 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-13-S10-S6

Fragment assembly with short reads

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-13-S10-S6

Identification of antigenic escape variants in an immunodominant epitope of hepatitis C virus

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-13-S10-S6

Sequence variation in the gene encoding the nonstructural 3 protein of hepatitis C virus: evidence for immune selection

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-13-S10-S6

Genetic variability of hepatitis C virus NS3 protein in human leukocyte antigen-A2 liver transplant recipients with recurrent hepatitis C.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-13-S10-S6

De novo fragment assembly with short mate-paired reads: Does the read length matter?

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382444

End-point limiting-dilution real-time PCR assay for evaluation of hepatitis C virus quasispecies in serum: performance under optimal and suboptimal conditions

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382444

Deep sequencing of a genetically heterogeneous sample: local haplotype reconstruction and read error correction

28 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22759430

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2105-13-S10-S6

1 reference

journals/bmcbi/SkumsDCVRFYZK12

1 August 2017

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

1 August 2017

1 reference