(Q34334283)

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Accurate, rapid and high-throughput detection of strain-specific polymorphisms in Bacillus anthracis and Yersinia pestis by next-generation sequencing

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scholarly article

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Europe PubMed Central

PubMed publication ID

1 August 2017

Accurate, rapid and high-throughput detection of strain-specific polymorphisms in Bacillus anthracis and Yersinia pestis by next-generation sequencing (English)

1 reference

Europe PubMed Central

PubMed publication ID

1 August 2017

Yersinia pestis

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Bacillus anthracis

1 reference

based on heuristic

inferred from title

15

object named as

Bruce Budowle

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Europe PubMed Central

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1 August 2017

author name string

Craig A Cummings

1

1 reference

Europe PubMed Central

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1 August 2017

Christina A Bormann Chung

2

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Europe PubMed Central

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1 August 2017

Rixun Fang

3

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Europe PubMed Central

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1 August 2017

Melissa Barker

4

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Europe PubMed Central

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1 August 2017

Pius Brzoska

5

1 reference

Europe PubMed Central

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1 August 2017

Phillip C Williamson

6

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Europe PubMed Central

PubMed publication ID

1 August 2017

Jodi Beaudry

7

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Europe PubMed Central

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1 August 2017

Molly Matthews

8

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Europe PubMed Central

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1 August 2017

James Schupp

9

1 reference

Europe PubMed Central

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1 August 2017

David M Wagner

10

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Europe PubMed Central

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1 August 2017

Dawn Birdsell

11

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Europe PubMed Central

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1 August 2017

Amy J Vogler

12

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Europe PubMed Central

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1 August 2017

Manohar R Furtado

13

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1 August 2017

Paul Keim

14

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1 August 2017

publication date

1 September 2010

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1 August 2017

Investigative Genetics

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1 August 2017

1

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1 August 2017

1

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Europe PubMed Central

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1 August 2017

5

1 reference

Europe PubMed Central

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1 August 2017

describes a project that uses

object named as

MUMmer

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

massive parallel sequencing

1 reference

based on heuristic

inferred from title

https://scigraph.springernature.com/pub.10.1186/2041-2223-1-5

0 references

Genome evolution and adaptation in a long-term experiment with Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2988479

6 July 2018

Humans and evolutionary and ecological forces shaped the phylogeography of recently emerged diseases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2988479

6 July 2018

Genome-wide mutational diversity in an evolving population of Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2988479

6 July 2018

Detecting SNPs and estimating allele frequencies in clonal bacterial populations by sequencing pooled DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2988479

6 July 2018

Phylogenetic understanding of clonal populations in an era of whole genome sequencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2988479

6 July 2018

Application of 'next-generation' sequencing technologies to microbial genetics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2988479

6 July 2018

The complete genome sequence of Bacillus anthracis Ames "Ancestor".

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2988479

6 July 2018

High-throughput sequencing provides insights into genome variation and evolution in Salmonella Typhi

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2988479

6 July 2018

Single nucleotide polymorphism typing of Bacillus anthracis from Sverdlovsk tissue

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2988479

6 July 2018

Assays for the rapid and specific identification of North American Yersinia pestis and the common laboratory strain CO92.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2988479

6 July 2018

The impact of next-generation sequencing technology on genetics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2988479

6 July 2018

Yersinia pestis evolution on a small timescale: comparison of whole genome sequences from North America

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2988479

6 July 2018

Global genetic population structure of Bacillus anthracis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2988479

6 July 2018

A North American Yersinia pestis draft genome sequence: SNPs and phylogenetic analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2988479

6 July 2018

Toward a system of microbial forensics: from sample collection to interpretation of evidence

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2988479

6 July 2018

Anthrax molecular epidemiology and forensics: using the appropriate marker for different evolutionary scales

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2988479

6 July 2018

Phylogenetic discovery bias in Bacillus anthracis using single-nucleotide polymorphisms from whole-genome sequencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2988479

6 July 2018

Versatile and open software for comparing large genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2988479

6 July 2018

Application of DNA microarrays to study the evolutionary genomics of Yersinia pestis and Yersinia pseudotuberculosis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2988479

6 July 2018

The genome sequence of Bacillus anthracis Ames and comparison to closely related bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2988479

6 July 2018

Comparative genome sequencing for discovery of novel polymorphisms in Bacillus anthracis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2988479

6 July 2018

Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT Method

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2988479

6 July 2018

Multiple-locus variable-number tandem repeat analysis reveals genetic relationships within Bacillus anthracis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2988479

6 July 2018

Yersinia pestis, the cause of plague, is a recently emerged clone of Yersinia pseudotuberculosis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2988479

6 July 2018

The 102-kilobase unstable region of Yersinia pestis comprises a high-pathogenicity island linked to a pigmentation segment which undergoes internal rearrangement

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2988479

6 July 2018

The pigmentation locus of Yersinia pestis KIM6+ is flanked by an insertion sequence and includes the structural genes for pesticin sensitivity and HMWP2.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2988479

6 July 2018

Loss of the pigmentation phenotype in Yersinia pestis is due to the spontaneous deletion of 102 kb of chromosomal DNA which is flanked by a repetitive element

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2988479

6 July 2018

Rapid whole-genome mutational profiling using next-generation sequencing technologies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2988479

27 October 2018

Rapid comparative genomic analysis for clinical microbiology: the Francisella tularensis paradigm

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2988479

27 October 2018

High resolution genotyping of Bacillus anthracis outbreak strains using four highly mutable single nucleotide repeat markers

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2988479

27 October 2018

Strain-specific single-nucleotide polymorphism assays for the Bacillus anthracis Ames strain

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2988479

27 October 2018

Genomics and microbiology. Microbial forensics--"cross-examining pathogens".

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2988479

27 October 2018

Use of forensic methods under exigent circumstances without full validation

1 reference

https://pubmed.ncbi.nlm.nih.gov/21092340

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

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10.1186/2041-2223-1-5

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Europe PubMed Central

PubMed publication ID

1 August 2017

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PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

1 August 2017

PubMed publication ID

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Europe PubMed Central

PubMed publication ID

1 August 2017

ResearchGate publication ID

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