(Q34335134)

1 August 2017

title

Targeted recovery of novel phylogenetic diversity from next-generation sequence data (English)

1 reference

1 August 2017

1 reference

3

Josh D Neufeld

1 reference

1 August 2017

Michael D J Lynch

1

1 reference

1 August 2017

Andrea K Bartram

series ordinal

2

1 reference

1 August 2017

publication date

12 July 2012

1 reference

1 August 2017

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1 August 2017

volume

6

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1 August 2017

issue

11

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1 August 2017

page(s)

2067-2077

1 reference

describes a project that uses

1 August 2017

Cytoscape

1 reference

9 June 2022

https://europepmc.org/search?query=(METHODS:'Cytoscape')

based on heuristic

inferred from PubMed Central ID database lookup

cites work

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6 July 2018

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The SAR11 group of alpha-proteobacteria is not related to the origin of mitochondria

6 July 2018

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Ultra-deep sequencing of foraminiferal microbarcodes unveils hidden richness of early monothalamous lineages in deep-sea sediments

6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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Fine-scale bacterial beta diversity within a complex ecosystem (Zodletone Spring, OK, USA): the role of the rare biosphere

6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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PANGEA: pipeline for analysis of next generation amplicons

6 July 2018

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Ecology of the rare microbial biosphere of the Arctic Ocean

6 July 2018

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6 July 2018

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Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities

6 July 2018

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Wrinkles in the rare biosphere: pyrosequencing errors can lead to artificial inflation of diversity estimates

6 July 2018

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6 July 2018

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The Ribosomal Database Project: improved alignments and new tools for rRNA analysis

6 July 2018

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6 July 2018

1 reference

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6 July 2018

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6 July 2018

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Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy

6 July 2018

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6 July 2018

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6 July 2018

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The ribosomal database project (RDP-II): introducing myRDP space and quality controlled public data

6 July 2018

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6 July 2018

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Microbial diversity in the deep sea and the underexplored "rare biosphere"

6 July 2018

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6 July 2018

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6 July 2018

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Unexpectedly high bacterial diversity in arctic tundra relative to boreal forest soils, revealed by serial analysis of ribosomal sequence tags

6 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3475379

Environmental genome shotgun sequencing of the Sargasso Sea

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3475379

Serial analysis of ribosomal sequence tags (SARST): a high-throughput method for profiling complex microbial communities.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3475379

Complete Genome Structure of Gloeobacter violaceus PCC 7421, a Cyanobacterium that Lacks Thylakoids

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3475379

Seasonal dynamics of previously unknown fungal lineages in tundra soils.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3475379

Novel bacterial lineages at the (sub)division level as detected by signature nucleotide-targeted recovery of 16S rRNA genes from bulk soil and rice roots of flooded rice microcosms

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3475379

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3475379

16S ribosomal DNA amplification for phylogenetic study

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3475379

The 'rare biosphere': a reality check

6 July 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FISMEJ.2012.50

Community and pigment structure of Arctic cyanobacterial assemblages: the occurrence and distribution of UV-absorbing compounds

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FISMEJ.2012.50

Insidious effects of sequencing errors on perceived diversity in molecular surveys

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22791239

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/ISMEJ.2012.50

1 reference

Dimensions Publication ID

1 August 2017

0 references

1 reference

1 August 2017

1 reference