(Q34349281)

1 August 2017

title

Global Biodiversity of Aquatic Ammonia-Oxidizing Archaea is Partitioned by Habitat (English)

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1 August 2017

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Steven J Biller

1

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1 August 2017

Annika C Mosier

series ordinal

2

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1 August 2017

George F Wells

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3

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1 August 2017

Christopher A Francis

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4

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1 August 2017

publication date

18 July 2012

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Frontiers in Microbiology

1 August 2017

published in

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1 August 2017

volume

3

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1 August 2017

page(s)

252

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Niche specialization of terrestrial archaeal ammonia oxidizers

1 August 2017

cites work

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6 July 2018

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Thaumarchaeotes abundant in refinery nitrifying sludges express amoA but are not obligate autotrophic ammonia oxidizers

6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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Genome of a low-salinity ammonia-oxidizing archaeon determined by single-cell and metagenomic analysis

6 July 2018

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Spatial variability in nitrification rates and ammonia-oxidizing microbial communities in the agriculturally impacted Elkhorn Slough estuary, California

6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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Environmental factors shaping the ecological niches of ammonia-oxidizing archaea

6 July 2018

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Revising the nitrogen cycle in the Peruvian oxygen minimum zone

6 July 2018

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The population genetics of dN/dS

6 July 2018

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Major gradients in putatively nitrifying and non-nitrifying Archaea in the deep North Atlantic

6 July 2018

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Relative abundance and diversity of ammonia-oxidizing archaea and bacteria in the San Francisco Bay estuary

6 July 2018

1 reference

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Mesophilic Crenarchaeota: proposal for a third archaeal phylum, the Thaumarchaeota

6 July 2018

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A moderately thermophilic ammonia-oxidizing crenarchaeote from a hot spring

6 July 2018

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Cultivation of a thermophilic ammonia oxidizing archaeon synthesizing crenarchaeol

6 July 2018

1 reference

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Changes in bacterial and archaeal community structure and functional diversity along a geochemically variable soil profile.

6 July 2018

1 reference

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New processes and players in the nitrogen cycle: the microbial ecology of anaerobic and archaeal ammonia oxidation.

6 July 2018

1 reference

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Quantitative analyses of the abundance and composition of ammonia-oxidizing bacteria and ammonia-oxidizing archaea of a Chinese upland red soil under long-term fertilization practices

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3399221

Global patterns in bacterial diversity

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3399221

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6 July 2018

1 reference

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Quantitative distribution of presumptive archaeal and bacterial nitrifiers in Monterey Bay and the North Pacific Subtropical Gyre

6 July 2018

1 reference

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6 July 2018

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6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3399221

Archaea predominate among ammonia-oxidizing prokaryotes in soils

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3399221

Occurrence of ammonia-oxidizing archaea in wastewater treatment plant bioreactors.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3399221

Pathways of carbon assimilation and ammonia oxidation suggested by environmental genomic analyses of marine Crenarchaeota

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3399221

Novel genes for nitrite reductase and Amo-related proteins indicate a role of uncultivated mesophilic crenarchaeota in nitrogen cycling

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3399221

Ubiquity and diversity of ammonia-oxidizing archaea in water columns and sediments of the ocean.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3399221

Isolation of an autotrophic ammonia-oxidizing marine archaeon

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3399221

Datamonkey: rapid detection of selective pressure on individual sites of codon alignments

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3399221

Not so different after all: a comparison of methods for detecting amino acid sites under selection

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3399221

HyPhy: hypothesis testing using phylogenies

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3399221

Environmental genome shotgun sequencing of the Sargasso Sea

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3399221

ARB: a software environment for sequence data

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3399221

A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3399221

Ecophysiology of an ammonia-oxidizing archaeon adapted to low-salinity habitats

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3399221

Determining the distribution of marine and coastal ammonia-oxidizing archaea and bacteria using a quantitative approach.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3399221

Activity, abundance and diversity of nitrifying archaea and bacteria in the central California Current

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3399221

Population ecology of nitrifying archaea and bacteria in the Southern California Bight

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3399221

Ammonia-oxidizing Archaea in the Arctic Ocean and Antarctic coastal waters

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3399221

Ammonia-oxidizing communities in a highly aerated full-scale activated sludge bioreactor: betaproteobacterial dynamics and low relative abundance of Crenarchaea

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3399221

Bacteria rather than Archaea dominate microbial ammonia oxidation in an agricultural soil

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3399221

Resource partitioning and sympatric differentiation among closely related bacterioplankton.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3399221

Shifts in the relative abundance of ammonia-oxidizing bacteria and archaea across physicochemical gradients in a subterranean estuary

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3399221

Molecular and biogeochemical evidence for ammonia oxidation by marine Crenarchaeota in the Gulf of California.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3399221

27 October 2018

Identifiers

DOI

10.3389/FMICB.2012.00252

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1 August 2017

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1 August 2017

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