(Q34351449)

1 August 2017

title

Single-molecule spectroscopic determination of lac repressor-DNA loop conformation (English)

1 reference

1 August 2017

Michael A Morgan

1

1 reference

1 August 2017

Kenji Okamoto

series ordinal

2

1 reference

1 August 2017

Jason D Kahn

series ordinal

3

1 reference

1 August 2017

Douglas S English

series ordinal

4

1 reference

1 August 2017

language of work or name

English

0 references

publication date

5 August 2005

1 reference

1 August 2017

1 reference

1 August 2017

volume

89

1 reference

1 August 2017

issue

4

1 reference

1 August 2017

page(s)

2588-2596

1 reference

A gamut of loops: meandering DNA.

1 August 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1366758

Short-Range Spectroscopic Ruler Based on a Single-Molecule Optical Switch

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1366758

Digital photoswitching of fluorescence based on the photochromism of diarylethene derivatives at a single-molecule level

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1366758

Secondary structure and secondary structure dynamics of DNA hairpins complexed with HIV-1 NC protein

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1366758

Measuring single-molecule nucleic acid dynamics in solution by two-color filtered ratiometric fluorescence correlation spectroscopy

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1366758

Geometric and dynamic requirements for DNA looping, wrapping and unwrapping in the activation of E.coli glnAp2 transcription by NtrC.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1366758

Fluorescence-aided molecule sorting: analysis of structure and interactions by alternating-laser excitation of single molecules

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1366758

Supercoiling and denaturation in Gal repressor/heat unstable nucleoid protein (HU)-mediated DNA looping

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1366758

Single molecule detection of DNA looping by NgoMIV restriction endonuclease

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1366758

Fluorescence resonance energy transfer over approximately 130 basepairs in hyperstable lac repressor-DNA loops

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1366758

Probing the free-energy surface for protein folding with single-molecule fluorescence spectroscopy

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1366758

Initiation and re-initiation of DNA unwinding by the Escherichia coli Rep helicase

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1366758

Protein surface salt bridges and paths for DNA wrapping

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1366758

Ratiometric single-molecule studies of freely diffusing biomolecules.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1366758

The role of rigidity in DNA looping-unlooping by AraC

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1366758

Single-pair fluorescence resonance energy transfer on freely diffusing molecules: observation of Förster distance dependence and subpopulations

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1366758

Crystal structure of the lactose operon repressor and its complexes with DNA and inducer

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1366758

Quality and position of the three lac operators of E. coli define efficiency of repression.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1366758

Crystal structure of lac repressor core tetramer and its implications for DNA looping

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1366758

6 July 2018

Intrinsically bent DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1366758

Stability of a Lac repressor mediated "looped complex".

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1366758

"Antiparallel" DNA loop in gal repressosome visualized by atomic force microscopy

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1366758

Nonclassical photon statistics in single-molecule fluorescence at room temperature

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1366758

Measurement of lactose repressor-mediated loop formation and breakdown in single DNA molecules

27 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16085773

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Designed hyperstable Lac repressor.DNA loop topologies suggest alternative loop geometries

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16085773

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1529/BIOPHYSJ.105.067728

1 reference

1 August 2017

1 reference

1 August 2017

1 reference