(Q34354071)

1 August 2017

title

Studying reactive processes with classical dynamics: rebinding dynamics in MbNO. (English)

1 reference

1 August 2017

2

Markus Meuwly

1 reference

1 August 2017

David R Nutt

1

1 reference

1 August 2017

language of work or name

English

0 references

publication date

2 December 2005

1 reference

1 August 2017

1 reference

1 August 2017

volume

90

1 reference

1 August 2017

issue

4

1 reference

1 August 2017

page(s)

1191-1201

1 reference

Structure of myoglobin: A three-dimensional Fourier synthesis at 2 A. resolution

1 August 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1367270

Free-energy barriers in MbCO rebinding.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1367270

Human myoglobin recognition of oxygen: dynamics of the energy landscape

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1367270

Unveiling functional protein motions with picosecond x-ray crystallography and molecular dynamics simulations

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1367270

Coupling of protein relaxation to ligand binding and migration in myoglobin.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1367270

Extended molecular dynamics simulation of the carbon monoxide migration in sperm whale myoglobin

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1367270

CO migration in native and mutant myoglobin: atomistic simulations for the understanding of protein function

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1367270

Theoretical investigation of infrared spectra and pocket dynamics of photodissociated carbonmonoxy myoglobin

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1367270

Structural dynamics of myoglobin: effect of internal cavities on ligand migration and binding

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1367270

Spin-dependent mechanism for diatomic ligand binding to heme

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1367270

Molecular dynamics simulations of biomolecules

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1367270

The role of structure, energy landscape, dynamics, and allostery in the enzymatic function of myoglobin

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1367270

Collective protein dynamics in relation to function

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1367270

MOLMOL: a program for display and analysis of macromolecular structures

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1367270

X-ray structure determination of a metastable state of carbonmonoxy myoglobin after photodissociation.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1367270

Ligand binding to heme proteins: connection between dynamics and function

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1367270

Ligand binding and protein relaxation in heme proteins: a room temperature analysis of NO geminate recombination.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1367270

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1367270

Ligand dynamics in myoglobin: calculation of infrared spectra for photodissociated NO.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1367270

Coherent switching with decay of mixing: an improved treatment of electronic coherence for non-Born-Oppenheimer trajectories.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1367270

The escape process of carbon monoxide from myoglobin to solution at physiological temperature.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1367270

Army ants algorithm for rare event sampling of delocalized nonadiabatic transitions by trajectory surface hopping and the estimation of sampling errors by the bootstrap method

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1367270

Non-Born-Oppenheimer trajectories with self-consistent decay of mixing.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1367270

Structural dynamics of myoglobin: ligand migration and binding in valine 68 mutants

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1367270

Watching a protein as it functions with 150-ps time-resolved x-ray crystallography

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1367270

Molecular dynamics simulation of NO recombination to myoglobin mutants.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1367270

Statistical theory of nonadiabatic transitions

27 October 2018

1 reference

12 December 2020

On the influence of semirigid environments on proton transfer along molecular chains

1 reference

12 December 2020

Heme protein dynamics revealed by geminate nitric oxide recombination in mutants of iron and cobalt myoglobin

1 reference

12 December 2020

Relaxation dynamics of myoglobin in solution

1 reference

12 December 2020

NO rebinding to myoglobin: a reactive molecular dynamics study

1 reference

12 December 2020

Protein conformation-induced modulation of ligand binding kinetics: a femtosecond mid-IR study of nitric oxide binding trajectories in myoglobin

1 reference

12 December 2020

Potential energy surface and molecular dynamics of MbNO: existence of an unsuspected FeON minimum

1 reference

12 December 2020

Dynamics of ligand binding to myoglobin

1 reference

12 December 2020

Structural dynamics of myoglobin

1 reference

12 December 2020

10.1529/BIOPHYSJ.105.071522

Identifiers

DOI

1 reference

1 August 2017

1 reference

1 August 2017

1 reference