(Q34355915)

30 June 2019

title

Breaking and joining single-stranded DNA: the HUH endonuclease superfamily (English)

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30 June 2019

author

Michael Chandler

1

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30 June 2019

Fernando de la Cruz

2

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30 June 2019

Gabriel Moncalian

5

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30 June 2019

author name string

Fred Dyda

3

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30 June 2019

Alison B Hickman

4

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30 June 2019

Bao Ton-Hoang

6

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30 June 2019

language of work or name

English

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publication date

8 July 2013

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30 June 2019

Nature Reviews Microbiology

published in

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30 June 2019

volume

11

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30 June 2019

issue

8

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30 June 2019

page(s)

525-538

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30 June 2019

https://scigraph.springernature.com/pub.10.1038/nrmicro3067

exact match

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cites work

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31 March 2020

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31 March 2020

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31 March 2020

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31 March 2020

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Integrative and sequence characteristics of a novel genetic element, ICE6013, in Staphylococcus aureus

31 March 2020

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The integrase of the conjugative transposon Tn916 directs strand- and sequence-specific cleavage of the origin of conjugal transfer, oriT, by the endonuclease Orf20

31 March 2020

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Autonomous plasmid-like replication of a conjugative transposon

31 March 2020

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Site-specific recombinase and integrase activities of a conjugative relaxase in recipient cells

31 March 2020

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31 March 2020

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31 March 2020

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The Structure of the Minimal Relaxase Domain of MobA at 2.1 Å Resolution

31 March 2020

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Roles of active site residues and the HUH motif of the F plasmid TraI relaxase

31 March 2020

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Analysis of DNA processing reactions in bacterial conjugation by using suicide oligonucleotides.

31 March 2020

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Tracking F plasmid TraI relaxase processing reactions provides insight into F plasmid transfer

31 March 2020

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Relaxase DNA binding and cleavage are two distinguishable steps in conjugative DNA processing that involve different sequence elements of the nic site

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO3067

Two domains at the origin are required for replication and maintenance of broad-host-range plasmid R1162.

31 March 2020

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Replication and conjugative mobilization of broad host-range IncQ plasmids

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO3067

Structure and function of primase RepB' encoded by broad-host-range plasmid RSF1010 that replicates exclusively in leading-strand mode

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO3067

RepB' is required in trans for the two single-strand DNA initiation signals in oriV of plasmid RSF1010

31 March 2020

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Differential roles of the transposon termini in IS91 transposition

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https://api.crossref.org/works/10.1038%2FNRMICRO3067

IS200: A salmonella-specific insertion sequence

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https://api.crossref.org/works/10.1038%2FNRMICRO3067

Transposable element ISHp608 of Helicobacter pylori: nonrandom geographic distribution, functional organization, and insertion specificity

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO3067

Characterization and distribution of IS8301 in the radioresistant bacterium Deinococcus radiodurans

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO3067

Single-stranded DNA transposition is coupled to host replication.

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO3067

Irradiation-induced Deinococcus radiodurans genome fragmentation triggers transposition of a single resident insertion sequence

31 March 2020

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Reassembly of shattered chromosomes in Deinococcus radiodurans

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO3067

Reconstitution of a functional IS608 single-strand transpososome: role of non-canonical base pairing

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO3067

Resetting the site: redirecting integration of an insertion sequence in a predictable way.

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO3067

Single-stranded DNA intermediates in IS91 rolling-circle transposition

31 March 2020

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Molecular domestication of transposable elements: from detrimental parasites to useful host genes.

31 March 2020

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1H, 13C, and 15N NMR assignment of the master Rep protein nuclease domain from the Nanovirus FBNYV

31 March 2020

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Genetic and biochemical characterization of MbeA, the relaxase involved in plasmid ColE1 conjugative mobilization

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Conserved structures and diversity of functions of RNA-binding proteins

31 March 2020

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A mechanism of duplex DNA replication revealed by enzymatic studies of phage phi X174: catalytic strand separation in advance of replication

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO3067

Site-specific integration by adeno-associated virus

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO3067

DNA structure modulates the oligomerization properties of the AAV initiator protein Rep68.

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO3067

Integration of adeno-associated virus (AAV) and recombinant AAV vectors

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO3067

A new domain of conjugative relaxase TrwC responsible for efficient oriT-specific recombination on minimal target sequences

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO3067

TrwC-mediated site-specific recombination is controlled by host factors altering local DNA topology

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO3067

Site-specific integration of foreign DNA into minimal bacterial and human target sequences mediated by a conjugative relaxase.

31 March 2020

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Nuclear targeting of a bacterial integrase that mediates site-specific recombination between bacterial and human target sequences

31 March 2020

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Conjugative DNA transfer into human cells by the VirB/VirD4 type IV secretion system of the bacterial pathogen Bartonella henselae.

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO3067

Transfer of R388 derivatives by a pathogenesis-associated type IV secretion system into both bacteria and human cells

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO3067

HUH site-specific recombinases for targeted modification of the human genome

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO3067

Massive amplification of rolling-circle transposons in the lineage of the bat Myotis lucifugus

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO3067

Helitrons on a roll: eukaryotic rolling-circle transposons

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO3067

Treasures in the attic: rolling circle transposons discovered in eukaryotic genomes

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO3067

A novel intercistronic regulatory element of prokaryotic operons

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO3067

Short palindromic repetitive DNA elements in enterobacteria: a survey

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO3067

Identification and characterization of repetitive extragenic palindromes (REP)-associated tyrosine transposases: implications for REP evolution and dynamics in bacterial genomes

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO3067

Within-genome evolution of REPINs: a new family of miniature mobile DNA in bacteria

31 March 2020

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A chimeric ribozyme in clostridium difficile combines features of group I introns and insertion elements

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Distribution of IS91 family insertion sequences in bacterial genomes: evolutionary implications.

31 March 2020

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12 December 2020

Rep-mediated nicking of the adeno-associated virus origin requires two biochemical activities, DNA helicase activity and transesterification.

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DNA sequences which support activities of the bacteriophage phi X174 gene A protein

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The Rep78 gene product of adeno-associated virus (AAV) self-associates to form a hexameric complex in the presence of AAV ori sequences

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Computer-assisted dissection of rolling circle DNA replication

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The Rep52 gene product of adeno-associated virus is a DNA helicase with 3'-to-5' polarity

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The mechanism of sequence-specific DNA cleavage and strand transfer by phi X174 gene A* protein

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Analysis of bacteriophage phi X174 gene A protein-mediated termination and reinitiation of phi X DNA synthesis. II. Structural characterization of the covalent phi X A protein-DNA complex

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Concerted action of three distinct domains in the DNA cleaving-joining reaction catalyzed by relaxase (TraI) of conjugative plasmid RP4.

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Replication and control of circular bacterial plasmids.

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A DNA structure is required for geminivirus replication origin function.

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The family of highly interrelated single-stranded deoxyribonucleic acid plasmids

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Identifiers

DOI

10.1038/NRMICRO3067

1 reference

30 June 2019

Dimensions Publication ID

0 references

1 reference

30 June 2019

PubMed ID

23832240

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30 June 2019