(Q34368299)

1 August 2017

title

The necessity of adjusting tests of protein category enrichment in discovery proteomics (English)

1 reference

1 August 2017

3

Eugene Kolker

0 references

author name string

Brenton Louie

series ordinal

1

1 reference

1 August 2017

Roger Higdon

series ordinal

2

1 reference

1 August 2017

language of work or name

English

0 references

publication date

9 November 2010

1 reference

1 August 2017

1 reference

1 August 2017

volume

26

1 reference

1 August 2017

issue

24

1 reference

1 August 2017

page(s)

3007-3011

1 reference

Meta-analysis for protein identification: a case study on yeast data

1 August 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2995116

A statistical model of protein sequence similarity and function similarity reveals overly-specific function predictions

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2995116

Comparative functional analysis of the Caenorhabditis elegans and Drosophila melanogaster proteomes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2995116

Prediction of high-responding peptides for targeted protein assays by mass spectrometry

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2995116

The APEX Quantitative Proteomics Tool: generating protein quantitation estimates from LC-MS/MS proteomics results

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2995116

Gene Ontology annotations at SGD: new data sources and annotation methods

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2995116

Using GOstats to test gene lists for GO term association

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2995116

Improved scoring of functional groups from gene expression data by decorrelating GO graph structure

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2995116

Protein identification and expression analysis using mass spectrometry

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2995116

Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2995116

Pathways to the analysis of microarray data

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2995116

Global analysis of protein expression in yeast

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2995116

Statistical significance for genomewide studies

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2995116

Proteomics to study genes and genomes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2995116

AAindex: amino acid index database

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2995116

Computational prediction of proteotypic peptides for quantitative proteomics.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2995116

A predictive model for identifying proteins by a single peptide match

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2995116

A note on the false discovery rate and inconsistent comparisons between experiments

27 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21068002

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Estimating false discovery rates for peptide and protein identification using randomized databases

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21068002

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/BIOINFORMATICS/BTQ541

1 reference

journals/bioinformatics/LouieHK10

1 August 2017

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

1 August 2017

1 reference