(Q34375170)

1 August 2017

Predicting indirect readout effects in protein-DNA interactions (English)

1 reference

1 August 2017

5

Donald M Crothers

1 reference

1 August 2017

Yongli Zhang

1

1 reference

1 August 2017

Zhiqun Xi

series ordinal

2

1 reference

1 August 2017

Rashmi S Hegde

series ordinal

3

1 reference

1 August 2017

Zippora Shakked

series ordinal

4

1 reference

1 August 2017

language of work or name

English

0 references

publication date

17 May 2004

1 reference

Proceedings of the National Academy of Sciences of the United States of America

1 August 2017

1 reference

1 August 2017

101

1 reference

1 August 2017

22

1 reference

1 August 2017

8337-8341

1 reference

A protein-DNA binding mechanism proceeds through multi-state or two-state parallel pathways

1 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=420395

High-throughput approach for detection of DNA bending and flexibility based on cyclization

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=420395

Structural origins of adenine-tract bending

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=420395

Statistical mechanics of sequence-dependent circular DNA and its application for DNA cyclization

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=420395

The papillomavirus E2 proteins: structure, function, and biology

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=420395

Intrinsic bending and deformability at the T-A step of CCTTTAAAGG: a comparative analysis of T-A and A-T steps within A-tracts

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=420395

DNA bending by an adenine-thymine tract and its role in gene regulation

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=420395

Global structure and mechanical properties of a 10-bp nucleosome positioning motif

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=420395

The structural basis of DNA target discrimination by papillomavirus E2 proteins

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=420395

Signals for TBP/TATA box recognition

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=420395

Crystal structure of the E2 DNA-binding domain from human papillomavirus type 16: implications for its DNA binding-site selection mechanism

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=420395

Structural code for DNA recognition revealed in crystal structures of papillomavirus E2-DNA targets

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=420395

DNA sequence-dependent deformability deduced from protein-DNA crystal complexes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=420395

DNA bending: the prevalence of kinkiness and the virtues of normality

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=420395

X-ray and solution studies of DNA oligomers and implications for the structural basis of A-tract-dependent curvature

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=420395

DNA flexibility studied by covalent closure of short fragments into circles

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=420395

DNA bending and its relation to nucleosome positioning.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=420395

DNA sequence determinants of CAP-induced bending and protein binding affinity.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=420395

Artificial nucleosome positioning sequences

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=420395

DNA bending, flexibility, and helical repeat by cyclization kinetics.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=420395

Alternative structures for alternating poly(dA-dT) tracts: the structure of the B-DNA decamer C-G-A-T-A-T-A-T-C-G

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=420395

Protein-induced bending and DNA cyclization

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=420395

Effect of non-contacted bases on the affinity of 434 operator for 434 repressor and Cro

6 July 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.0402319101

DNA twisting and the effects of non-contacted bases on affinity of 434 operator for 434 represser

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.0402319101

The Affinity-Enhancing Roles of Flexible Linkers in Two-Domain DNA-Binding Proteins†

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.0402319101

Pre-bending of a promoter sequence enhances affinity for the TATA-binding factor

21 January 2018

1 reference

12 December 2020

A novel form of the DNA double helix imposed on the TATA-box by the TATA-binding protein

1 reference

12 December 2020

DNA binding and bending by the human papillomavirus type 16 E2 protein. Recognition of an extended binding site

1 reference

12 December 2020

DNA structure and flexibility in the sequence-specific binding of papillomavirus E2 proteins

1 reference

12 December 2020

The influence of polyvalency on the binding properties of antibodies

1 reference

12 December 2020

Identifiers

DOI

10.1073/PNAS.0402319101

1 reference

1 August 2017

0 references

1 reference

1 August 2017

1 reference