(Q34379045)

1 August 2017

title

β-Propeller blades as ancestral peptides in protein evolution (English)

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1 August 2017

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2

Andrei N Lupas

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1 August 2017

Klaus O Kopec

1

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1 August 2017

language of work or name

English

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publication date

15 October 2013

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1 August 2017

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1 August 2017

volume

8

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1 August 2017

issue

10

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1 August 2017

page(s)

e77074

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Creative Commons Attribution 4.0 International

1 August 2017

copyright license

start time

15 October 2013

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

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6 July 2018

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Structural features and ligand binding properties of tandem WW domains from YAP and TAZ, nuclear effectors of the Hippo pathway

6 July 2018

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Differences in the mannose oligomer specificities of the closely related lectins from Galanthus nivalis and Zea mays strongly determine their eventual anti-HIV activity

6 July 2018

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6 July 2018

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How significant is a protein structure similarity with TM-score = 0.5?

6 July 2018

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Evolution of outer membrane beta-barrels from an ancestral beta beta hairpin

6 July 2018

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Ligands bind to Sortilin in the tunnel of a ten-bladed beta-propeller domain

6 July 2018

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DNA topoisomerases: harnessing and constraining energy to govern chromosome topology

6 July 2018

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Cradle-loop barrels and the concept of metafolds in protein classification by natural descent.

6 July 2018

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Curculin exhibits sweet-tasting and taste-modifying activities through its distinct molecular surfaces

6 July 2018

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Signal integration in the endoplasmic reticulum unfolded protein response

6 July 2018

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On the origin of the histone fold

6 July 2018

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SISYPHUS--structural alignments for proteins with non-trivial relationships

6 July 2018

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Common evolutionary origin of swapped-hairpin and double-psi beta barrels

6 July 2018

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The crystal structure of human IRE1 luminal domain reveals a conserved dimerization interface required for activation of the unfolded protein response

6 July 2018

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Evolution of protein fold in the presence of functional constraints

6 July 2018

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WW or WoW: the WW domains in a union of bliss

6 July 2018

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On the mechanism of sensing unfolded protein in the endoplasmic reticulum

6 July 2018

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Lectins as bioactive plant proteins: a potential in cancer treatment

6 July 2018

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The HHpred interactive server for protein homology detection and structure prediction

6 July 2018

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TM-align: a protein structure alignment algorithm based on the TM-score

6 July 2018

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Protein homology detection by HMM-HMM comparison

6 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3797127

Scoring function for automated assessment of protein structure template quality

6 July 2018

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6 July 2018

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Prebiotic Chemistry and the Origin of the RNA World

6 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3797127

The C-terminal domain of DNA gyrase A adopts a DNA-bending beta-pinwheel fold

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3797127

More than the sum of their parts: on the evolution of proteins from peptides

6 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3797127

On the evolution of protein folds: are similar motifs in different protein folds the result of convergence, insertion, or relics of an ancient peptide world?

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3797127

Fold change in evolution of protein structures

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3797127

Sialidase-like Asp-boxes: sequence-similar structures within different protein folds

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3797127

KH domain: one motif, two folds

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3797127

Proteins of the endoplasmic-reticulum-associated degradation pathway: domain detection and function prediction

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3797127

Crystal structure of a dimeric mannose-specific agglutinin from garlic: quaternary association and carbohydrate specificity

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3797127

Atomic structure of clathrin: a beta propeller terminal domain joins an alpha zigzag linker

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3797127

Function driven protein evolution. A possible proto-protein for the RNA-binding proteins

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3797127

Relics from the RNA world

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3797127

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3797127

Conversion of DNA gyrase into a conventional type II topoisomerase

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3797127

The WW domain: a signalling site in dystrophin?

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3797127

The rsp5-domain is shared by proteins of diverse functions

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3797127

The refined structure of the quinoprotein methanol dehydrogenase from Methylobacterium extorquens at 1.94 A

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3797127

Structure of mannose-specific snowdrop (Galanthus nivalis) lectin is representative of a new plant lectin family

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3797127

Distinguishing Homologous from Analogous Proteins

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3797127

Evolution of the beta-propeller fold.

6 July 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0077074

De novo identification of highly diverged protein repeats by probabilistic consistency

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0077074

Structural mechanism governing the quaternary organization of monocot mannose-binding lectin revealed by the novel monomeric structure of an orchid lectin

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0077074

The "GyrA-box" is required for the ability of DNA gyrase to wrap DNA and catalyze the supercoiling reaction

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0077074

The structural basis for substrate specificity in DNA topoisomerase IV.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0077074

RCC1-like repeat proteins: a pangenomic, structurally diverse new superfamily of beta-propeller domains.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0077074

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3797127

Impact of snowdrop lectin (Galanthus nivalis agglutinin; GNA) on adults of the green lacewing, Chrysoperla carnea.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3797127

Recognition of analogous and homologous protein folds: analysis of sequence and structure conservation 1 1Edited by F. E. Cohen

27 October 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0077074

Multiplicity of carbohydrate-binding sites in beta-prism fold lectins: occurrence and possible evolutionary implications

21 January 2018

1 reference

12 December 2020

Sequence and structural determinants of mannose recognition

1 reference

12 December 2020

C-terminal domain of gyrase A is predicted to have a beta-propeller structure

1 reference

12 December 2020

Structure of the topoisomerase IV C-terminal domain: a broken beta-propeller implies a role as geometry facilitator in catalysis

1 reference

12 December 2020

10.1371/JOURNAL.PONE.0077074

Identifiers

DOI

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1 August 2017

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1 August 2017

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