(Q34384020)

English

Transcriptome-wide characterization of miRNA-directed and non-miRNA-directed endonucleolytic cleavage using Degradome analysis under low ambient temperature in Phalaenopsis aphrodite subsp. formosana

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scholarly article

1 reference

Europe PubMed Central

1 August 2017

Transcriptome-wide characterization of miRNA-directed and non-miRNA-directed endonucleolytic cleavage using Degradome analysis under low ambient temperature in Phalaenopsis aphrodite subsp. formosana (English)

1 reference

Europe PubMed Central

1 August 2017

0 references

Phalaenopsis aphrodite

object named as

Phalaenopsis aphrodite

1 reference

based on heuristic

inferred from title

author name string

Feng-Ming An

1

1 reference

Europe PubMed Central

1 August 2017

Ming-Tsair Chan

2

1 reference

Europe PubMed Central

1 August 2017

publication date

17 August 2012

1 reference

Europe PubMed Central

1 August 2017

number of pages

14

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inferred from page(s)

Plant and Cell Physiology

1 reference

Europe PubMed Central

1 August 2017

53

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Europe PubMed Central

1 August 2017

10

1 reference

Europe PubMed Central

1 August 2017

1737-1750

1 reference

Europe PubMed Central

1 August 2017

Modulation of floral development by a gibberellin-regulated microRNA

1 reference

https://api.crossref.org/works/10.1093%2FPCP%2FPCS118

21 January 2018

Endogenous siRNA and miRNA targets identified by sequencing of the Arabidopsis degradome

1 reference

https://api.crossref.org/works/10.1093%2FPCP%2FPCS118

21 January 2018

CleaveLand: a pipeline for using degradome data to find cleaved small RNA targets

1 reference

https://api.crossref.org/works/10.1093%2FPCP%2FPCS118

21 January 2018

Sliced microRNA targets and precise loop-first processing of MIR319 hairpins revealed by analysis of the Physcomitrella patens degradome

1 reference

https://api.crossref.org/works/10.1093%2FPCP%2FPCS118

21 January 2018

Genes involved in organ separation in Arabidopsis: an analysis of the cup-shaped cotyledon mutant

1 reference

https://api.crossref.org/works/10.1093%2FPCP%2FPCS118

21 January 2018

Sequencing-based approaches reveal low ambient temperature-responsive and tissue-specific microRNAs in phalaenopsis orchid

1 reference

https://api.crossref.org/works/10.1093%2FPCP%2FPCS118

21 January 2018

Regulation of flowering time and floral organ identity by a MicroRNA and its APETALA2-like target genes

1 reference

https://api.crossref.org/works/10.1093%2FPCP%2FPCS118

21 January 2018

Update of ASRP: the Arabidopsis Small RNA Project database

1 reference

https://api.crossref.org/works/10.1093%2FPCP%2FPCS118

21 January 2018

Temperature during the day, but not during the night, controls flowering of Phalaenopsis orchids

1 reference

https://api.crossref.org/works/10.1093%2FPCP%2FPCS118

21 January 2018

Global analysis of the mammalian RNA degradome reveals widespread miRNA-dependent and miRNA-independent endonucleolytic cleavage

1 reference

https://api.crossref.org/works/10.1093%2FPCP%2FPCS118

21 January 2018

Characterization of Oncidium 'Gower Ramsey' transcriptomes using 454 GS-FLX pyrosequencing and their application to the identification of genes associated with flowering time

1 reference

https://api.crossref.org/works/10.1093%2FPCP%2FPCS118

21 January 2018

Real-time quantification of microRNAs by stem-loop RT-PCR

1 reference

https://api.crossref.org/works/10.1093%2FPCP%2FPCS118

21 January 2018

Cool-night temperature induces spike emergence and affects photosynthetic efficiency and metabolizable carbohydrate and organic acid pools in Phalaenopsis aphrodite

1 reference

https://api.crossref.org/works/10.1093%2FPCP%2FPCS118

21 January 2018

Regulation of phosphate homeostasis by MicroRNA in Arabidopsis.

1 reference

https://api.crossref.org/works/10.1093%2FPCP%2FPCS118

21 January 2018

Blast2GO: A comprehensive suite for functional analysis in plant genomics

1 reference

https://api.crossref.org/works/10.1093%2FPCP%2FPCS118

21 January 2018

psRNATarget: a plant small RNA target analysis server

1 reference

https://api.crossref.org/works/10.1093%2FPCP%2FPCS118

21 January 2018

Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis

1 reference

https://api.crossref.org/works/10.1093%2FPCP%2FPCS118

21 January 2018

The miRNA156/157 recognition element in the 3' UTR of the Arabidopsis SBP box gene SPL3 prevents early flowering by translational inhibition in seedlings.

1 reference

https://api.crossref.org/works/10.1093%2FPCP%2FPCS118

21 January 2018

Tryptophan residues promote membrane association for a plant lipid glycosyltransferase involved in phosphate stress.

1 reference

https://api.crossref.org/works/10.1093%2FPCP%2FPCS118

21 January 2018

Construction of Parallel Analysis of RNA Ends (PARE) libraries for the study of cleaved miRNA targets and the RNA degradome

1 reference

https://api.crossref.org/works/10.1093%2FPCP%2FPCS118

21 January 2018

miRBase: tools for microRNA genomics

1 reference

https://api.crossref.org/works/10.1093%2FPCP%2FPCS118

21 January 2018

Small-interfering RNAs from natural antisense transcripts derived from a cellulose synthase gene modulate cell wall biosynthesis in barley

1 reference

https://api.crossref.org/works/10.1093%2FPCP%2FPCS118

21 January 2018

Fast folding and comparison of RNA secondary structures

1 reference

https://api.crossref.org/works/10.1093%2FPCP%2FPCS118

21 January 2018

Gene discovery using next-generation pyrosequencing to develop ESTs for Phalaenopsis orchids

1 reference

https://api.crossref.org/works/10.1093%2FPCP%2FPCS118

21 January 2018

The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla

1 reference

https://api.crossref.org/works/10.1093%2FPCP%2FPCS118

21 January 2018

Identification and remediation of biases in the activity of RNA ligases in small-RNA deep sequencing.

1 reference

https://api.crossref.org/works/10.1093%2FPCP%2FPCS118

21 January 2018

Natural antisense transcripts with coding capacity in Arabidopsis may have a regulatory role that is not linked to double-stranded RNA degradation

1 reference

https://api.crossref.org/works/10.1093%2FPCP%2FPCS118

21 January 2018

Long noncoding RNA: unveiling hidden layer of gene regulatory networks

1 reference

https://api.crossref.org/works/10.1093%2FPCP%2FPCS118

21 January 2018

Cold calcium signaling in Arabidopsis involves two cellular pools and a change in calcium signature after acclimation

1 reference

https://api.crossref.org/works/10.1093%2FPCP%2FPCS118

21 January 2018

TCP transcription factors regulate the activities of ASYMMETRIC LEAVES1 and miR164, as well as the auxin response, during differentiation of leaves in Arabidopsis

1 reference

https://api.crossref.org/works/10.1093%2FPCP%2FPCS118

21 January 2018

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

1 reference

https://api.crossref.org/works/10.1093%2FPCP%2FPCS118

21 January 2018

microRNA172 down-regulates glossy15 to promote vegetative phase change in maize

1 reference

https://api.crossref.org/works/10.1093%2FPCP%2FPCS118

21 January 2018

Genetic framework for flowering-time regulation by ambient temperature-responsive miRNAs in Arabidopsis

1 reference

https://api.crossref.org/works/10.1093%2FPCP%2FPCS118

21 January 2018

Comparative analysis of miRNAs and their targets across four plant species

1 reference

https://api.crossref.org/works/10.1093%2FPCP%2FPCS118

21 January 2018

Genome-wide characterization of new and drought stress responsive microRNAs in Populus euphratica

1 reference

https://api.crossref.org/works/10.1093%2FPCP%2FPCS118

21 January 2018

Transcriptome-wide identification of microRNA targets in rice

1 reference

https://api.crossref.org/works/10.1093%2FPCP%2FPCS118

21 January 2018

Profiling of cold-stress-responsive miRNAs in rice by microarrays.

1 reference

https://api.crossref.org/works/10.1093%2FPCP%2FPCS118

21 January 2018

Sculpting the flower; the role of microRNAs in flower development

1 reference

https://api.crossref.org/works/10.1093%2FPCP%2FPCS118

21 January 2018

Facile means for quantifying microRNA expression by real-time PCR

1 reference

https://api.crossref.org/works/10.1093%2FPCP%2FPCS118

21 January 2018

Identification of miRNAs and their target genes in developing soybean seeds by deep sequencing

1 reference

https://api.crossref.org/works/10.1093%2FPCP%2FPCS118

21 January 2018

De novo assembly of expressed transcripts and global analysis of the Phalaenopsis aphrodite transcriptome

1 reference

https://api.crossref.org/works/10.1093%2FPCP%2FPCS118

21 January 2018

Origin, biogenesis, and activity of plant microRNAs

1 reference

https://api.crossref.org/works/10.1093%2FPCP%2FPCS118

21 January 2018

miR156-regulated SPL transcription factors define an endogenous flowering pathway in Arabidopsis thaliana

1 reference

https://api.crossref.org/works/10.1093%2FPCP%2FPCS118

21 January 2018

Arabidopsis microRNA167 controls patterns of ARF6 and ARF8 expression, and regulates both female and male reproduction.

1 reference

https://api.crossref.org/works/10.1093%2FPCP%2FPCS118

21 January 2018

miRDeepFinder: a miRNA analysis tool for deep sequencing of plant small RNAs

1 reference

https://api.crossref.org/works/10.1093%2FPCP%2FPCS118

21 January 2018

Identification of miRNAs and their target genes using deep sequencing and degradome analysis in trifoliate orange [Poncirus trifoliata L. Raf] [corrected].

1 reference

https://api.crossref.org/works/10.1093%2FPCP%2FPCS118

21 January 2018

Identification of cold-inducible microRNAs in plants by transcriptome analysis.

1 reference

https://api.crossref.org/works/10.1093%2FPCP%2FPCS118

21 January 2018

Identifiers

10.1093/PCP/PCS118

1 reference

Europe PubMed Central

1 August 2017

1 reference

Europe PubMed Central

1 August 2017

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