(Q34395651)

English

Stratification of Archaea in the deep sediments of a freshwater meromictic lake: vertical shift from methanogenic to uncultured archaeal lineages

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22927959%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

Stratification of Archaea in the deep sediments of a freshwater meromictic lake: vertical shift from methanogenic to uncultured archaeal lineages (English)

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Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22927959%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

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5

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22927959%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

Guillaume Borrel

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Guillaume Borrel

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12 February 2020

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Anne-Catherine Lehours

2

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12 February 2020

Olivier Crouzet

3

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12 February 2020

Didier Jézéquel

4

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12 February 2020

Amélie Kulczak

6

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12 February 2020

Emilie Duffaud

7

1 reference

Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22927959%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

Keith Joblin

8

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22927959%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

Gérard Fonty

9

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12 February 2020

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21 August 2012

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12 February 2020

1 reference

Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22927959%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

7

1 reference

Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22927959%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

8

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22927959%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

e43346

1 reference

Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22927959%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

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Creative Commons Attribution 4.0 International

21 August 2012

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April 2022 Public Data File from Crossref

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0 references

Local conditions structure unique archaeal communities in the anoxic sediments of meromictic Lake Kivu

1 reference

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Production and consumption of methane in freshwater lake ecosystems

1 reference

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Enrichment of a microbial community performing anaerobic oxidation of methane in a continuous high-pressure bioreactor

1 reference

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6 July 2018

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

1 reference

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The Thaumarchaeota: an emerging view of their phylogeny and ecophysiology

1 reference

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6 July 2018

Enrichment and cultivation of prokaryotes associated with the sulphate-methane transition zone of diffusion-controlled sediments of Aarhus Bay, Denmark, under heterotrophic conditions.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424224

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Phylogenetic ecology of widespread uncultured clades of the Kingdom Euryarchaeota

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424224

6 July 2018

Insights into the evolution of Archaea and eukaryotic protein modifier systems revealed by the genome of a novel archaeal group.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424224

6 July 2018

Archaeal and bacterial communities respond differently to environmental gradients in anoxic sediments of a California hypersaline lake, the Salton Sea

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424224

6 July 2018

Depth-related change in archaeal community structure in a freshwater lake sediment as determined with denaturing gradient gel electrophoresis of amplified 16S rRNA genes and reversely transcribed rRNA fragments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424224

6 July 2018

Archaeal communities associated with shallow to deep subseafloor sediments of the New Caledonia Basin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424224

6 July 2018

probeCheck--a central resource for evaluating oligonucleotide probe coverage and specificity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424224

6 July 2018

Significant contribution of Archaea to extant biomass in marine subsurface sediments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424224

6 July 2018

Characterization of the depth-related changes in the microbial communities in Lake Hovsgol sediment by 16S rRNA gene-based approaches

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424224

6 July 2018

Dominance of putative marine benthic Archaea in Qinghai Lake, north-western China

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424224

6 July 2018

Mesophilic Crenarchaeota: proposal for a third archaeal phylum, the Thaumarchaeota

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424224

6 July 2018

Uncultured archaea in deep marine subsurface sediments: have we caught them all?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424224

6 July 2018

Microbial response to salinity change in Lake Chaka, a hypersaline lake on Tibetan plateau

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424224

6 July 2018

Adaptations to energy stress dictate the ecology and evolution of the Archaea

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424224

6 July 2018

The ribosomal database project (RDP-II): introducing myRDP space and quality controlled public data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424224

6 July 2018

Vertical profiles of methanogenesis and methanogens in two contrasting acidic peatlands in central New York State, USA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424224

6 July 2018

Community structure of Archaea and Bacteria in a profundal lake sediment Lake Kinneret (Israel).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424224

6 July 2018

Rapid Extraction of DNA and rRNA from Sediments by a Novel Hydroxyapatite Spin-Column Method.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424224

6 July 2018

Heterotrophic Archaea dominate sedimentary subsurface ecosystems off Peru

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424224

6 July 2018

Biogeographical distribution and diversity of microbes in methane hydrate-bearing deep marine sediments on the Pacific Ocean Margin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424224

6 July 2018

Anaerobic microbial communities in Lake Pavin, a unique meromictic lake in France

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424224

6 July 2018

Soot deposition in the Great Lakes: implications for semi-volatile hydrophobic organic pollutant deposition.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424224

6 July 2018

Bellerophon: a program to detect chimeric sequences in multiple sequence alignments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424224

6 July 2018

Microsite-dependent changes in methanogenic populations in a boreal oligotrophic fen.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424224

6 July 2018

Diversity and abundance of Crenarchaeota in terrestrial habitats studied by 16S RNA surveys and real time PCR.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424224

6 July 2018

Analysis of the sulfate-reducing bacterial and methanogenic archaeal populations in contrasting Antarctic sediments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424224

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Archaeal diversity in waters from deep South African gold mines

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424224

6 July 2018

rRNA operon copy number reflects ecological strategies of bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424224

6 July 2018

Population structure and phylogenetic characterization of marine benthic Archaea in deep-sea sediments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424224

6 July 2018

Vertical distribution of methanogens in the anoxic sediment of Rotsee (Switzerland).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424224

6 July 2018

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1 reference

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Novel euryarchaeotal lineages detected on rice roots and in the anoxic bulk soil of flooded rice microcosms

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1 reference

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Metabolic interactions among intestinal microorganisms

1 reference

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Rapid determination of 16S ribosomal RNA sequences for phylogenetic analyses

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424224

6 July 2018

Archaea in coastal marine environments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424224

6 July 2018

Polypeptide nature of growth requirement in yeast extract for Thermoplasma acidophilum

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6 July 2018

Evidence for anaerobic oxidation of methane in sediments of a freshwater system (Lago di Cadagno).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424224

27 October 2018

Global ecological patterns in uncultured Archaea.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424224

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Using ecological diversity measures with bacterial communities.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424224

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Manganese- and iron-dependent marine methane oxidation

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424224

27 October 2018

Phylogenetic diversity of archaea and bacteria in the anoxic zone of a meromictic lake (Lake Pavin, France).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424224

27 October 2018

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424224

27 October 2018

217 000-year-old DNA sequences of green sulfur bacteria in Mediterranean sapropels and their implications for the reconstruction of the paleoenvironment

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424224

27 October 2018

Vertical distribution of structure and function of the methanogenic archaeal community in Lake Dagow sediment.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424224

27 October 2018

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424224

27 October 2018

Group-specific primer and probe sets to detect methanogenic communities using quantitative real-time polymerase chain reaction.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424224

27 October 2018

Methanogenic pathway and archaeal community structure in the sediment of eutrophic Lake Dagow: effect of temperature

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424224

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424224

27 October 2018

Evidence for anaerobic syntrophic acetate oxidation during methane production in the profundal sediment of subtropical Lake Kinneret (Israel).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424224

27 October 2018

A marine microbial consortium apparently mediating anaerobic oxidation of methane

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424224

9 December 2018

Methane-Consuming Archaea Revealed by Directly Coupled Isotopic and Phylogenetic Analysis

1 reference

https://pubmed.ncbi.nlm.nih.gov/22927959

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The vertical distribution of bacterial and archaeal communities in the water and sediment of Lake Taihu

1 reference

https://pubmed.ncbi.nlm.nih.gov/22927959

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Small ribosomal RNA content in marine Proteobacteria during non-steady-state growth

1 reference

https://pubmed.ncbi.nlm.nih.gov/22927959

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

16S ribosomal DNA-directed PCR primers for ruminal methanogens and identification of methanogens colonising young lambs

1 reference

https://pubmed.ncbi.nlm.nih.gov/22927959

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of novel Archaea in bacterioplankton of a boreal forest lake by phylogenetic analysis and fluorescent in situ hybridization(1)

1 reference

https://pubmed.ncbi.nlm.nih.gov/22927959

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterization of depth-related microbial community structure in lake sediment by denaturing gradient gel electrophoresis of amplified 16S rDNA and reversely transcribed 16S rRNA fragments

1 reference

https://pubmed.ncbi.nlm.nih.gov/22927959

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1371/JOURNAL.PONE.0043346

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22927959%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

2012PLoSO...743346B

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PMC publication ID

1 reference

Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22927959%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22927959%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

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