(Q34416720)

2 August 2017

title

Transcriptomic analysis of the red seaweed Laurencia dendroidea (Florideophyceae, Rhodophyta) and its microbiome (English)

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2 August 2017

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Laurencia dendroidea

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8

Fabiano L Thompson

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2 August 2017

author name string

Louisi Souza de Oliveira

1

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2 August 2017

Gustavo Bueno Gregoracci

2

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2 August 2017

Genivaldo Gueiros Zacarias Silva

3

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2 August 2017

Leonardo Tavares Salgado

4

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2 August 2017

Gilberto Amado Filho

5

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2 August 2017

Marcio Alves-Ferreira

6

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2 August 2017

Renato Crespo Pereira

7

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2 August 2017

language of work or name

English

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publication date

17 September 2012

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2 August 2017

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2 August 2017

volume

13

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2 August 2017

page(s)

487

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describes a project that uses

2 August 2017

MUMmer

object named as

MUMMER

MUMmer

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

MUMmer

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cites work

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Analysis of Porphyra membrane transporters demonstrates gene transfer among photosynthetic eukaryotes and numerous sodium-coupled transport systems

6 July 2018

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Effects of coral reef benthic primary producers on dissolved organic carbon and microbial activity

6 July 2018

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Should we stay or should we go: mechanisms and ecological consequences for biofilm dispersal

6 July 2018

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Exploration and mining of the bacterial terpenome

6 July 2018

1 reference

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Comparison of RNA expression profiles on generations of Porphyra yezoensis (Rhodophyta), based on suppression subtractive hybridization (SSH)

6 July 2018

1 reference

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Spatial dynamics of benthic competition on coral reefs.

6 July 2018

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Mechanisms and principles of N-linked protein glycosylation

6 July 2018

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Bacterial community assembly based on functional genes rather than species

6 July 2018

1 reference

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In vivo and in vitro anti-inflammatory activity of neorogioltriol, a new diterpene extracted from the red algae Laurencia glandulifera

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

Ecological role of a seaweed secondary metabolite for a colonizing bacterial community.

6 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

Red and green algal monophyly and extensive gene sharing found in a rich repertoire of red algal genes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

Quality control and preprocessing of metagenomic datasets

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

Improving yeast strains using recyclable integration cassettes, for the production of plant terpenoids

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

Microbial diversity associated with four functional groups of benthic reef algae and the reef-building coral Montastraea annularis

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

Effect of elatol, isolated from red seaweed Laurencia dendroidea, on Leishmania amazonensis

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

In vitro anti-trypanosomal activity of elatol isolated from red seaweed Laurencia dendroidea

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

The Ectocarpus genome and the independent evolution of multicellularity in brown algae

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

Identifying biologically relevant differences between metagenomic communities

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

Cytotoxic halogenated metabolites from the Brazilian red alga Laurencia catarinensis.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

Variability and abundance of the epiphytic bacterial community associated with a green marine Ulvacean alga

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

Monoterpene and sesquiterpene synthases and the origin of terpene skeletal diversity in plants

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

Diversity of sesquiterpene synthases in the basidiomycete Coprinus cinereus

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

Mini-review: quorum sensing in the marine environment and its relationship to biofouling.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

The metagenomics RAST server - a public resource for the automatic phylogenetic and functional analysis of metagenomes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

Antibacterial activity of halogenated sesquiterpenes from Malaysian Laurencia spp.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

Laurencia okamurai extract containing laurinterol induces apoptosis in melanoma cells

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

Differential transcriptional analysis of the cyanobacterium Cyanothece sp. strain ATCC 51142 during light-dark and continuous-light growth

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

Phylogenetic analysis of bacteria associated with Laminaria saccharina

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

Analysis of expressed sequence tags from the red alga Griffithsia okiensis.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

The Chlamydomonas genome reveals the evolution of key animal and plant functions

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

Phylogeny of Proteobacteria and Bacteroidetes from oxic habitats of a tidal flat ecosystem

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

Algae acquire vitamin B12 through a symbiotic relationship with bacteria

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

Genome sequencing in microfabricated high-density picolitre reactors

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

Defense against protein carbonylation by DnaK/DnaJ and proteases of the heat shock regulon

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

Nuclear DNA content estimates in multicellular green, red and brown algae: phylogenetic considerations

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

Chemotaxis of Silicibacter sp. strain TM1040 toward dinoflagellate products.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

Genome sequence of the ultrasmall unicellular red alga Cyanidioschyzon merolae 10D

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

Versatile and open software for comparing large genomes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

Engineering a mevalonate pathway in Escherichia coli for production of terpenoids

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

Crosstalk between cytosolic and plastidial pathways of isoprenoid biosynthesis in Arabidopsis thaliana

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

Nitrogen fixation and photosynthetic oxygen evolution in cyanobacteria

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

TIGR Gene Indices clustering tools (TGICL): a software system for fast clustering of large EST datasets

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

Mevalonate and nonmevalonate pathways for the biosynthesis of isoprene units.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

Isoprenoid biosynthesis via 1-deoxy-D-xylulose 5-phosphate/2-C-methyl-D-erythritol 4-phosphate (DOXP/MEP) pathway

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

Generation of 10,154 expressed sequence tags from a leafy gametophyte of a marine red alga, Porphyra yezoensis

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

Natural assemblages of marine proteobacteria and members of the Cytophaga-Flavobacter cluster consuming low- and high-molecular-weight dissolved organic matter

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

Redox sensing by prokaryotic transcription factors

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

The discovery of a mevalonate-independent pathway for isoprenoid biosynthesis in bacteria, algae and higher plants

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

Organization and expression of nitrogen-fixation genes in the aerobic nitrogen-fixing unicellular cyanobacterium Synechococcus sp. strain RF-1.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

Evidence that halogenated furanones from Delisea pulchra inhibit acylated homoserine lactone (AHL)-mediated gene expression by displacing the AHL signal from its receptor protein.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

Flagellar and twitching motility are necessary for Pseudomonas aeruginosa biofilm development

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

Incorporation of 1-deoxy-D-xylulose into isoprene and phytol by higher plants and algae

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

Quorum sensing in Vibrio fischeri: evidence that S-adenosylmethionine is the amino acid substrate for autoinducer synthesis

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

Oxidative stress responses in Escherichia coli and Salmonella typhimurium

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

Potent antibacterial activity of halogenated compounds against antibiotic-resistant bacteria.

6 July 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-487

Brominated sesquiterpenes from the red alga Laurencia obtusa.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-487

The catalytic asymmetric total synthesis of elatol

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-487

Intra-cellular storage, transport and exocytosis of halogenated compounds in marine red alga Laurencia obtusa.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-487

Gibberellin biosynthesis in bacteria: separate ent-copalyl diphosphate and ent-kaurene synthases in Bradyrhizobium japonicum

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-487

A five-year study of solar ultraviolet radiation in southern Chile (39 degrees S): potential impact on physiology of coastal marine algae?

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-487

Amino-acid cycling drives nitrogen fixation in the legume–Rhizobium symbiosis

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-487

Vanadium haloperoxidase-catalyzed bromination and cyclization of terpenes

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-487

Different regulation of haloperoxidation during agar oligosaccharide-activated defence mechanisms in two related red algae, Gracilaria sp. and Gracilaria chilensis

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

Quorum sensing antagonism from marine organisms

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

Ecological roles of natural products of the Brazilian red seaweed Laurencia obtusa.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

Potent antibacterial activity of halogenated metabolites from Malaysian red algae, Laurencia majuscula (Rhodomelaceae, Ceramiales).

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534612

The identification of primary sites of superoxide and hydrogen peroxide formation in the aerobic respiratory chain and sulfite reductase complex of Escherichia coli

27 October 2018

1 reference

12 December 2020

Antibacterial halogenated metabolites from the Malaysian Laurencia species

1 reference

12 December 2020

Is the mussel test a good indicator of antifouling activity? A comparison between laboratory and field assays

1 reference

12 December 2020

Lipid peroxidation, protein thiol oxidation and DNA damage in hydrogen peroxide-induced injury to endothelial cells: role of activation of poly(ADP-ribose)polymerase

1 reference

12 December 2020

LAURENCIA MARILZAE SP. NOV. (CERAMIALES, RHODOPHYTA) FROM THE CANARY ISLANDS, SPAIN, BASED ON MORPHOLOGICAL AND MOLECULAR EVIDENCE(1).

1 reference

12 December 2020

Identifiers

DOI

10.1186/1471-2164-13-487

1 reference

Dimensions Publication ID

2 August 2017

0 references

1 reference

2 August 2017

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