(Q34423553)

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Quantitative genome-wide enhancer activity maps for five Drosophila species show functional enhancer conservation and turnover during cis-regulatory evolution

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scholarly article

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Europe PubMed Central

2 August 2017

Quantitative genome-wide enhancer activity maps for five Drosophila species show functional enhancer conservation and turnover during cis-regulatory evolution (English)

1 reference

Europe PubMed Central

2 August 2017

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2

1 reference

Europe PubMed Central

2 August 2017

Alexander Stark

8

1 reference

Europe PubMed Central

2 August 2017

object named as

Daniel Spies

3

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Yuliya A Sytnikova

object named as

Yuliya A Sytnikova

5

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object named as

Nelson C Lau

7

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author name string

Cosmas D Arnold

1

1 reference

Europe PubMed Central

2 August 2017

Jessica A Matts

4

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Europe PubMed Central

2 August 2017

Michaela Pagani

6

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Europe PubMed Central

2 August 2017

language of work or name

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publication date

8 June 2014

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Europe PubMed Central

2 August 2017

Nature Genetics

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Europe PubMed Central

2 August 2017

46

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Europe PubMed Central

2 August 2017

7

1 reference

Europe PubMed Central

2 August 2017

685-692

1 reference

Europe PubMed Central

2 August 2017

https://scigraph.springernature.com/pub.10.1038/ng.3009

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Small RNA library construction from minute biological samples

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Extensive divergence of transcription factor binding in Drosophila embryos with highly conserved gene expression

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Massively parallel in vivo enhancer assay reveals that highly local features determine the cis-regulatory function of ChIP-seq peaks.

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Strong purifying selection at synonymous sites in D. melanogaster

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Holo-TFIID controls the magnitude of a transcription burst and fine-tuning of transcription

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Genome-wide quantitative enhancer activity maps identified by STARR-seq

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6 July 2018

Nomadic enhancers: tissue-specific cis-regulatory elements of yellow have divergent genomic positions among Drosophila species

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6 July 2018

Five-vertebrate ChIP-seq reveals the evolutionary dynamics of transcription factor binding

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6 July 2018

Functional evolution of cis-regulatory modules at a homeotic gene in Drosophila

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6 July 2018

A regulatory circuit for piwi by the large Maf gene traffic jam in Drosophila.

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6 July 2018

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1 reference

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Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

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6 July 2018

Evolution acts on enhancer organization to fine-tune gradient threshold readouts

1 reference

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6 July 2018

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6 July 2018

Species-specific transcription in mice carrying human chromosome 21

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6 July 2018

Human-specific gain of function in a developmental enhancer

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6 July 2018

Evo-Devo and an Expanding Evolutionary Synthesis: A Genetic Theory of Morphological Evolution

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6 July 2018

Sepsid even-skipped enhancers are functionally conserved in Drosophila despite lack of sequence conservation

1 reference

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6 July 2018

JASPAR, the open access database of transcription factor-binding profiles: new content and tools in the 2008 update

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6 July 2018

Discovery of functional elements in 12 Drosophila genomes using evolutionary signatures

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6 July 2018

Evolution of genes and genomes on the Drosophila phylogeny

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6 July 2018

Divergence of transcription factor binding sites across related yeast species

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6 July 2018

Tissue-specific transcriptional regulation has diverged significantly between human and mouse

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6 July 2018

The evolutionary significance of cis-regulatory mutations

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Large-scale discovery of promoter motifs in Drosophila melanogaster

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Large-scale turnover of functional transcription factor binding sites in Drosophila

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6 July 2018

Repeated morphological evolution through cis-regulatory changes in a pleiotropic gene

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6 July 2018

The UCSC Genome Browser Database: update 2006

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6 July 2018

Functional evolution of a cis-regulatory module

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6 July 2018

Chance caught on the wing: cis-regulatory evolution and the origin of pigment patterns in Drosophila

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6 July 2018

Evidence for stabilizing selection in a eukaryotic enhancer element.

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6 July 2018

Combining evidence using p-values: application to sequence homology searches

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6 July 2018

High conservation of transcription factor binding and evidence for combinatorial regulation across six Drosophila species.

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21 January 2018

Evolutionary changes in cis and trans gene regulation

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A computational pipeline for comparative ChIP-seq analyses.

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Functional genomic analysis of phagocytosis and identification of a Drosophila receptor for E. coli

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Conservation of RET regulatory function from human to zebrafish without sequence similarity

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12 December 2020

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Identifiers

10.1038/NG.3009

1 reference

Europe PubMed Central

2 August 2017

1 reference

Europe PubMed Central

2 August 2017

1 reference

Europe PubMed Central

2 August 2017

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