(Q34439935)

2 August 2017

title

Genetic interactions reveal the evolutionary trajectories of duplicate genes (English)

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2 August 2017

5

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2 August 2017

Anastasia Baryshnikova

object named as

Anastasia Baryshnikova

7

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author name string

Benjamin VanderSluis

1

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2 August 2017

Jeremy Bellay

2

1 reference

2 August 2017

Gabriel Musso

3

1 reference

2 August 2017

Michael Costanzo

4

1 reference

2 August 2017

Franco J Vizeacoumar

6

1 reference

2 August 2017

Brenda Andrews

8

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2 August 2017

Charles Boone

9

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2 August 2017

Chad L Myers

10

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2 August 2017

publication date

1 November 2010

1 reference

Molecular Systems Biology

2 August 2017

published in

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2 August 2017

volume

6

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2 August 2017

page(s)

429

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3010121

2 August 2017

1 reference

The genetic landscape of a cell

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3010121

The evolution of gene duplications: classifying and distinguishing between models

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3010121

Systematic mapping of genetic interaction networks

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3010121

Binding interactions control SNARE specificity in vivo

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3010121

Turning a hobby into a job: how duplicated genes find new functions

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3010121

Pervasive and persistent redundancy among duplicated genes in yeast

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3010121

Escape from adaptive conflict after duplication in an anthocyanin pathway gene

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3010121

The extensive and condition-dependent nature of epistasis among whole-genome duplicates in yeast

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3010121

The transcriptional landscape of the yeast genome defined by RNA sequencing

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3010121

NCBI BLAST: a better web interface

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3010121

The chemical genomic portrait of yeast: uncovering a phenotype for all genes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3010121

Functional diversification of duplicate genes through subcellular adaptation of encoded proteins

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3010121

The evolutionary dynamics of the Saccharomyces cerevisiae protein interaction network after duplication

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3010121

The microtubule-based motor Kar3 and plus end-binding protein Bim1 provide structural support for the anaphase spindle.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3010121

Natural history and evolutionary principles of gene duplication in fungi

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3010121

Increased glycolytic flux as an outcome of whole-genome duplication in yeast

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3010121

Retention of protein complex membership by ancient duplicated gene products in budding yeast

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3010121

Comparative analysis indicates regulatory neofunctionalization of yeast duplicates

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3010121

Vik1 modulates microtubule-Kar3 interactions through a motor domain that lacks an active site

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3010121

Functional analysis of gene duplications in Saccharomyces cerevisiae

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3010121

SNAREs--engines for membrane fusion

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3010121

Finding function: evaluation methods for functional genomic data

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3010121

The regulatory utilization of genetic redundancy through responsive backup circuits

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3010121

Global landscape of protein complexes in the yeast Saccharomyces cerevisiae

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3010121

Proteome survey reveals modularity of the yeast cell machinery

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3010121

High-dimensional and large-scale phenotyping of yeast mutants.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3010121

Role of selection in fixation of gene duplications

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3010121

Metabolic functions of duplicate genes in Saccharomyces cerevisiae

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3010121

The Yeast Gene Order Browser: combining curated homology and syntenic context reveals gene fate in polyploid species

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3010121

Cik1 targets the minus-end kinesin depolymerase kar3 to microtubule plus ends.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3010121

Rapid subfunctionalization accompanied by prolonged and substantial neofunctionalization in duplicate gene evolution

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3010121

The altered evolutionary trajectories of gene duplicates

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3010121

A scale of functional divergence for yeast duplicated genes revealed from analysis of the protein-protein interaction network

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3010121

Proof and evolutionary analysis of ancient genome duplication in the yeast Saccharomyces cerevisiae

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3010121

Global mapping of the yeast genetic interaction network

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3010121

Asymmetric sequence divergence of duplicate genes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3010121

Different evolutionary patterns between young duplicate genes in the human genome

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3010121

Role of duplicate genes in genetic robustness against null mutations

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3010121

Rapid divergence in expression between duplicate genes inferred from microarray data

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3010121

Characterization of temperature-sensitive mutations in the yeast syntaxin 1 homologues Sso1p and Sso2p, and evidence of a distinct function for Sso1p in sporulation.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3010121

Systematic genetic analysis with ordered arrays of yeast deletion mutants

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3010121

Yeast Bim1p promotes the G1-specific dynamics of microtubules.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3010121

Twilight zone of protein sequence alignments

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3010121

Preservation of duplicate genes by complementary, degenerative mutations

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3010121

Differential regulation of the Kar3p kinesin-related protein by two associated proteins, Cik1p and Vik1p

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3010121

Dissecting the regulatory circuitry of a eukaryotic genome

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3010121

Localization of the Kar3 kinesin heavy chain-related protein requires the Cik1 interacting protein

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3010121

Suppressors of yeast actin mutations

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3010121

Consistent patterns of rate asymmetry and gene loss indicate widespread neofunctionalization of yeast genes after whole-genome duplication

6 July 2018

1 reference

https://api.crossref.org/works/10.1038%2FMSB.2010.82

Rate asymmetry after genome duplication causes substantial long-branch attraction artifacts in the phylogeny of Saccharomyces species

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FMSB.2010.82

Extent of gene duplication in the genomes of Drosophila, nematode, and yeast.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FMSB.2010.82

All duplicates are not equal: the difference between small-scale and genome duplication

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FMSB.2010.82

Exploring the functional landscape of gene expression: directed search of large microarray compendia

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FMSB.2010.82

The evolution of functionally novel proteins after gene duplication.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FMSB.2010.82

Backup without redundancy: genetic interactions reveal the cost of duplicate gene loss

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FMSB.2010.82

Higher gene duplicabilities for metabolic proteins than for nonmetabolic proteins in yeast and E. coli.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FMSB.2010.82

Metabolic network analysis of the causes and evolution of enzyme dispensability in yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FMSB.2010.82

A burst of protein sequence evolution and a prolonged period of asymmetric evolution follow gene duplication in yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FMSB.2010.82

Rate of protein evolution versus fitness effect of gene deletion

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FMSB.2010.82

Genetics of natural populations; recombination and variability in populations of Drosophila pseudoobscura.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3010121

In Vitro Fusion Catalyzed by the Sporulation-Specific t-SNARE Light-Chain Spo20p is Stimulated by Phosphatidic Acid

27 October 2018

1 reference

https://api.crossref.org/works/10.1038%2FMSB.2010.82

Higher duplicability of less important genes in yeast genomes

21 January 2018

1 reference

12 December 2020

Asymmetric functional divergence of duplicate genes in yeast

1 reference

12 December 2020

Can genes be truly redundant?

1 reference

12 December 2020

Positioning of the mitotic spindle by a cortical-microtubule capture mechanism

1 reference

12 December 2020

Exposing the fitness contribution of duplicated genes

1 reference

12 December 2020

Identifiers

DOI

10.1038/MSB.2010.82

1 reference

2 August 2017

1 reference

2 August 2017

1 reference