(Q34442041)

2 August 2017

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title

LINEs, SINEs and processed pseudogenes: parasitic strategies for genome modeling (English)

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2 August 2017

Dewannieux M

1

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2 August 2017

Heidmann T

series ordinal

2

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2 August 2017

publication date

1 January 2005

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Cytogenetics and Genome Research

2 August 2017

published in

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2 August 2017

volume

110

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2 August 2017

issue

1-4

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2 August 2017

page(s)

35-48

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Alu repeats and human genomic diversity

2 August 2017

cites work

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LINEs and Alus--the polyA connection

21 January 2018

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RNAs from all categories generate retrosequences that may be exapted as novel genes or regulatory elements

21 January 2018

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Hot L1s account for the bulk of retrotransposition in the human population

21 January 2018

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The site-specific ribosomal insertion element type II of Bombyx mori (R2Bm) contains the coding sequence for a reverse transcriptase-like enzyme

21 January 2018

1 reference

A new family of chimeric retrotranscripts formed by a full copy of U6 small nuclear RNA fused to the 3' terminus of l1.

21 January 2018

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The human genome contains many types of chimeric retrogenes generated through in vivo RNA recombination

21 January 2018

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A human Alu RNA-binding protein whose expression is associated with accumulation of small cytoplasmic Alu RNA

21 January 2018

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Potential Alu function: regulation of the activity of double-stranded RNA-activated kinase PKR.

21 January 2018

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Targeting of human retrotransposon integration is directed by the specificity of the L1 endonuclease for regions of unusual DNA structure.

21 January 2018

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Human L1 element target-primed reverse transcription in vitro

21 January 2018

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Alu repeats and human disease

21 January 2018

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21 January 2018

Mammalian retroelements.

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RNA-mediated recombination in S. cerevisiae

21 January 2018

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LINE-mediated retrotransposition of marked Alu sequences

21 January 2018

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Identification of autonomous IAP LTR retrotransposons mobile in mammalian cells

21 January 2018

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Retroviral vector system for the study of cDNA gene formation

21 January 2018

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cDNA genes formed after infection with retroviral vector particles lack the hallmarks of natural processed pseudogenes

21 January 2018

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Human LINE retrotransposons generate processed pseudogenes

21 January 2018

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Transposable elements controlling I-R hybrid dysgenesis in D. melanogaster are similar to mammalian LINEs

21 January 2018

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Human L1 retrotransposon encodes a conserved endonuclease required for retrotransposition

21 January 2018

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Retrotransposon R1Bm endonuclease cleaves the target sequence.

21 January 2018

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Transcriptional disruption by the L1 retrotransposon and implications for mammalian transcriptomes

21 January 2018

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A new retrotransposable human L1 element from the LRE2 locus on chromosome 1q produces a chimaeric insertion

21 January 2018

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Initial sequencing and analysis of the human genome

21 January 2018

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Taming of transposable elements by homology-dependent gene silencing.

21 January 2018

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Sequence patterns indicate an enzymatic involvement in integration of mammalian retroposons

21 January 2018

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LINEs mobilize SINEs in the eel through a shared 3' sequence.

21 January 2018

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A novel class of SINE elements derived from 5S rRNA.

21 January 2018

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Full-length human L1 insertions retain the capacity for high frequency retrotransposition in cultured cells

21 January 2018

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In vitro properties of the first ORF protein from mouse LINE-1 support its role in ribonucleoprotein particle formation during retrotransposition

21 January 2018

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The birth of an alternatively spliced exon: 3' splice-site selection in Alu exons

21 January 2018

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Unusual features of integrated cDNAs generated by infection with genome-free retroviruses

21 January 2018

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Differential stress induction of individual Alu loci: implications for transcription and retrotransposition

21 January 2018

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Physiological stresses increase mouse short interspersed element (SINE) RNA expression in vivo

21 January 2018

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The sequence of a large L1Md element reveals a tandemly repeated 5' end and several features found in retrotransposons

21 January 2018

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RNA template requirements for target DNA-primed reverse transcription by the R2 retrotransposable element

21 January 2018

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Reverse transcription of R2Bm RNA is primed by a nick at the chromosomal target site: a mechanism for non-LTR retrotransposition

21 January 2018

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The age and evolution of non-LTR retrotransposable elements

21 January 2018

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Characterization of a non-long terminal repeat retrotransposon cDNA (L1Tc) from Trypanosoma cruzi: homology of the first ORF with the ape family of DNA repair enzymes.

21 January 2018

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Ribonucleoprotein particles with LINE-1 RNA in mouse embryonal carcinoma cells

21 January 2018

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Nucleic acid chaperone activity of the ORF1 protein from the mouse LINE-1 retrotransposon

21 January 2018

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Trimeric structure for an essential protein in L1 retrotransposition

21 January 2018

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Targeted nuclear import of open reading frame 1 protein is required for in vivo retrotransposition of a telomere-specific non-long terminal repeat retrotransposon, SART1.

21 January 2018

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Retroelement distributions in the human genome: variations associated with age and proximity to genes

21 January 2018

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High frequency retrotransposition in cultured mammalian cells

21 January 2018

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Exon shuffling by L1 retrotransposition

21 January 2018

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DNA repair mediated by endonuclease-independent LINE-1 retrotransposition

21 January 2018

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Initial sequencing and comparative analysis of the mouse genome

21 January 2018

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An actively retrotransposing, novel subfamily of mouse L1 elements

21 January 2018

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The 3' ends of tRNA-derived short interspersed repetitive elements are derived from the 3' ends of long interspersed repetitive elements

21 January 2018

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Whole-genome screening indicates a possible burst of formation of processed pseudogenes and Alu repeats by particular L1 subfamilies in ancestral primates

21 January 2018

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SINEs and LINEs share common 3' sequences: a review.

21 January 2018

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Structural analysis of TRAS1, a novel family of telomeric repeat-associated retrotransposons in the silkworm, Bombyx mori

21 January 2018

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Biology of mammalian L1 retrotransposons

21 January 2018

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Retrotransposons provide an evolutionarily robust non-telomerase mechanism to maintain telomeres

21 January 2018

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RNA truncation by premature polyadenylation attenuates human mobile element activity

21 January 2018

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Element-specific localization of Drosophila retrotransposon Gag proteins occurs in both nucleus and cytoplasm

21 January 2018

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Intracellular Targeting of Gag Proteins of theDrosophilaTelomeric Retrotransposons

21 January 2018

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Alu elements and the human genome

21 January 2018

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Selective stimulation of translational expression by Alu RNA.

21 January 2018

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Many human L1 elements are capable of retrotransposition

21 January 2018

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Does SINE evolution preclude Alu function?

21 January 2018

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Specificity of RNA maturation pathways: RNAs transcribed by RNA polymerase III are not substrates for splicing or polyadenylation

21 January 2018

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Unit-length line-1 transcripts in human teratocarcinoma cells

21 January 2018

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The origin of interspersed repeats in the human genome

21 January 2018

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Alu-containing exons are alternatively spliced

21 January 2018

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A new family of site-specific retrotransposons, SART1, is inserted into telomeric repeats of the silkworm, Bombyx mori

21 January 2018

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Human L1 retrotransposition: cis preference versus trans complementation

21 January 2018

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Nonviral retroposons: genes, pseudogenes, and transposable elements generated by the reverse flow of genetic information

21 January 2018

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Shared protein components of SINE RNPs

21 January 2018

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Identification of the endonuclease domain encoded by R2 and other site-specific, non-long terminal repeat retrotransposable elements

21 January 2018

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Phylogenetic Analysis of Ribonuclease H Domains Suggests a Late, Chimeric Origin of LTR Retrotransposable Elements and Retroviruses

21 January 2018

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21 January 2018

Identifiers

DOI

10.1159/000084936

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2 August 2017

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