(Q36407664)

14 August 2017

Identification of the endonuclease domain encoded by R2 and other site-specific, non-long terminal repeat retrotransposable elements (English)

1 reference

14 August 2017

2

Harmit S. Malik

0 references

author name string

Jin Yang

series ordinal

1

0 references

Thomas H. Eickbush

series ordinal

3

0 references

language of work or name

English

0 references

publication date

1 July 1999

1 reference

Proceedings of the National Academy of Sciences of the United States of America

14 August 2017

1 reference

14 August 2017

96

1 reference

14 August 2017

7847-7852

1 reference

14 August 2017

14

1 reference

The age and evolution of non-LTR retrotransposable elements

14 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22150

The domain structure and retrotransposition mechanism of R2 elements are conserved throughout arthropods

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22150

FokI dimerization is required for DNA cleavage

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22150

Structure of FokI has implications for DNA cleavage

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22150

RNA-induced changes in the activity of the endonuclease encoded by the R2 retrotransposable element

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22150

Retrotransposon R1Bm endonuclease cleaves the target sequence.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22150

The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22150

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22150

Structure of the multimodular endonuclease FokI bound to DNA

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22150

High frequency retrotransposition in cultured mammalian cells

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22150

Human L1 retrotransposon encodes a conserved endonuclease required for retrotransposition

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22150

R4, a non-LTR retrotransposon specific to the large subunit rRNA genes of nematodes

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22150

The crystal structure of EcoRV endonuclease and of its complexes with cognate and non-cognate DNA fragments

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22150

Single amino acid substitutions uncouple the DNA binding and strand scission activities of Fok I endonuclease.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22150

Dong, a non-long terminal repeat (non-LTR) retrotransposable element from Bombyx mori

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22150

Evolutionary relationships among group II intron-encoded proteins and identification of a conserved domain that may be related to maturase function

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22150

Solution structure of a specific DNA complex of the Myb DNA-binding domain with cooperative recognition helices

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22150

Self-splicing group I and group II introns encode homologous (putative) DNA endonucleases of a new family

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22150

Reverse transcription of R2Bm RNA is primed by a nick at the chromosomal target site: a mechanism for non-LTR retrotransposition

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22150

A new non-LTR retrotransposon provides evidence for multiple distinct site-specific elements in Crithidia fasciculata miniexon arrays

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22150

RNA template requirements for target DNA-primed reverse transcription by the R2 retrotransposable element

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22150

Composite transposable elements in the Xenopus laevis genome

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22150

Site-specific mutagenesis of AIDS virus reverse transcriptase

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22150

SLACS retrotransposon from Trypanosoma brucei gambiense is similar to mammalian LINEs

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22150

A rapidly rearranging retrotransposon within the miniexon gene locus of Crithidia fasciculata

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22150

Reverse Transcriptase Encoded by a Human Transposable Element

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22150

A new member of a family of site-specific retrotransposons is present in the spliced leader RNA genes of Trypanosoma cruzi

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22150

Origin and evolution of retroelements based upon their reverse transcriptase sequences

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22150

Transpositional recombination: mechanistic insights from studies of mu and other elements

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22150

Retroviral Reverse Transcription and Integration: Progress and Problems

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22150

Are retrotransposons long-term hitchhikers?

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22150

Zepp, a LINE-like retrotransposon accumulated in the Chlorella telomeric region

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22150

Amino acid sequence motif of group I intron endonucleases is conserved in open reading frames of group II introns

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22150

Characterization of a non-long terminal repeat retrotransposon cDNA (L1Tc) from Trypanosoma cruzi: homology of the first ORF with the ape family of DNA repair enzymes.

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22150

Functional expression of a sequence-specific endonuclease encoded by the retrotransposon R2Bm

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22150

Quick-change pathogens gain an evolutionary edge.

28 June 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.14.7847

Antigenic variation in malaria

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.14.7847

Retrohoming of a bacterial group II intron: mobility via complete reverse splicing, independent of homologous DNA recombination

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22150

A site-directed mutagenesis study to identify amino acid residues involved in the catalytic function of the restriction endonuclease EcoRV

21 October 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.14.7847

Retrohoming of a Bacterial Group II Intron

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.14.7847

Mobility of yeast mitochondrial group II introns: engineering a new site specificity and retrohoming via full reverse splicing

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.14.7847

The galvanization of biology: a growing appreciation for the roles of zinc

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/10393910

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.96.14.7847

1 reference

release_z5iv27rvw5f2xf4odcicjjh5ti

14 August 2017

0 references

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/z5iv27rvw5f2xf4odcicjjh5ti

mapped directly with Wikidata item

24 November 2022

based on heuristic

PMCID

22150

1 reference

14 August 2017

1 reference

PMCID

22150