(Q34445022)

2 August 2017

title

Evaluation of two approaches for assessing the genetic similarity of virioplankton populations as defined by genome size (English)

1 reference

2 August 2017

Shawn W Polson

2

0 references

author name string

Sanchita Jamindar

1

1 reference

2 August 2017

Sharath Srinivasiah

3

1 reference

2 August 2017

Lisa Waidner

4

1 reference

2 August 2017

K Eric Wommack

5

1 reference

2 August 2017

language of work or name

English

0 references

publication date

12 October 2012

1 reference

Applied and Environmental Microbiology

2 August 2017

published in

1 reference

2 August 2017

volume

78

1 reference

2 August 2017

issue

24

1 reference

2 August 2017

page(s)

8773-8783

1 reference

Links between viruses and prokaryotes throughout the water column along a North Atlantic latitudinal transect.

2 August 2017

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6 July 2018

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6 July 2018

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Repeating patterns of virioplankton production within an estuarine ecosystem

6 July 2018

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6 July 2018

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Randomly amplified polymorphic DNA reveals tight links between viruses and microbes in the bathypelagic zone of the Northwestern Mediterranean Sea

6 July 2018

1 reference

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Seasonal dynamics and metagenomic characterization of estuarine viriobenthos assemblages by randomly amplified polymorphic DNA PCR

6 July 2018

1 reference

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Dynamics and diversity of newly produced virioplankton in the North Sea.

6 July 2018

1 reference

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Randomly amplified polymorphic DNA PCR as a tool for assessment of marine viral richness

6 July 2018

1 reference

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6 July 2018

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The Sorcerer II Global Ocean Sampling expedition: northwest Atlantic through eastern tropical Pacific

6 July 2018

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5500 Phages examined in the electron microscope

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3502916

The ancient Virus World and evolution of cells

6 July 2018

1 reference

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Annually reoccurring bacterial communities are predictable from ocean conditions

6 July 2018

1 reference

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Seasonal variations in virus-host populations in Norwegian coastal waters: focusing on the cyanophage community infecting marine Synechococcus spp.

6 July 2018

1 reference

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Genetic diversity among five T4-like bacteriophages

6 July 2018

1 reference

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6 July 2018

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Marine T4-type bacteriophages, a ubiquitous component of the dark matter of the biosphere

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3502916

Structural and functional similarities between the capsid proteins of bacteriophages T4 and HK97 point to a common ancestry

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3502916

The genome of S-PM2, a "photosynthetic" T4-type bacteriophage that infects marine Synechococcus strains

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3502916

Three Prochlorococcus cyanophage genomes: signature features and ecological interpretations

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3502916

Phage-host interaction: an ecological perspective

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3502916

Cyanophage diversity, inferred from g20 gene analyses, in the largest natural lake in France, Lake Bourget

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3502916

Structure and morphogenesis of bacteriophage T4.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3502916

The diversity and evolution of the T4-type bacteriophages

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3502916

Origins of highly mosaic mycobacteriophage genomes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3502916

6 July 2018

Global phage diversity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3502916

6 July 2018

Bacteriophage T4 Genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3502916

Genomic analysis of uncultured marine viral communities

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3502916

The Phage Proteomic Tree: a genome-based taxonomy for phage

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3502916

Evolution of DNA polymerase families: evidences for multiple gene exchange between cellular and viral proteins

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3502916

Snapshot of the genome of the pseudo-T-even bacteriophage RB49.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3502916

A conserved genetic module that encodes the major virion components in both the coliphage T4 and the marine cyanophage S-PM2

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3502916

Application of digital image analysis and flow cytometry to enumerate marine viruses stained with SYBR gold

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3502916

Phylogeny of the major head and tail genes of the wide-ranging T4-type bacteriophages

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3502916

Virioplankton: Viruses in Aquatic Ecosystems

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3502916

Displacement of cellular proteins by functional analogues from plasmids or viruses could explain puzzling phylogenies of many DNA informational proteins

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3502916

Marine viruses and their biogeochemical and ecological effects

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3502916

Evolutionary relationships among diverse bacteriophages and prophages: all the world's a phage

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3502916

Hybridization analysis of chesapeake bay virioplankton

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3502916

Population dynamics of chesapeake bay virioplankton: total-community analysis by pulsed-field gel electrophoresis

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3502916

The genome of the pseudo T-even bacteriophages, a diverse group that resembles T4.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3502916

Lysogenic conversion by a filamentous phage encoding cholera toxin

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3502916

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3502916

High abundance of viruses found in aquatic environments.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3502916

Distribution of viruses in the Chesapeake Bay.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3502916

Seasonality and monthly dynamics of marine myovirus communities

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3502916

Lysogenic virus-host interactions predominate at deep-sea diffuse-flow hydrothermal vents

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3502916

The capsid of the T4 phage superfamily: the evolution, diversity, and structure of some of the most prevalent proteins in the biosphere.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3502916

Global-scale processes with a nanoscale drive: the role of marine viruses.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3502916

Photosynthetic genes in viral populations with a large genomic size range from Norwegian coastal waters

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3502916

A selective barrier to horizontal gene transfer in the T4-type bacteriophages that has preserved a core genome with the viral replication and structural genes

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3502916

A catalogue of T4-type bacteriophages.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3502916

The use of degenerate-primed random amplification of polymorphic DNA (DP-RAPD) for strain-typing and inferring the genetic similarity among closely related viruses

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3502916

Molecular characterization of T4-type bacteriophages in a rice field

27 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23064328

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Modular architecture of the T4 phage superfamily: a conserved core genome and a plastic periphery

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23064328

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1128/AEM.02432-12

1 reference

2 August 2017

1 reference

2 August 2017

1 reference