(Q34451771)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25468874%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

title

The Y-chromosome tree bursts into leaf: 13,000 high-confidence SNPs covering the majority of known clades (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25468874%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

19

1 reference

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24 February 2020

Chiara Batini

2

1 reference

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24 February 2020

Pierpaolo Maisano Delser

4

1 reference

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24 February 2020

Eduardo Arroyo-Pardo

6

1 reference

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24 February 2020

Gianpiero L. Cavalleri

7

1 reference

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24 February 2020

Peter de Knijff

8

1 reference

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24 February 2020

Giovanni Destro Bisol

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25468874%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

Turi King

13

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25468874%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

Maarten Larmuseau

14

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25468874%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

Adolfo López de Munain

15

1 reference

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24 February 2020

Ana Maria Lopez Parra

16

1 reference

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24 February 2020

Jelena Milasin

18

1 reference

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24 February 2020

Antti Sajantila

21

1 reference

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24 February 2020

Aslihan Tolun

24

1 reference

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24 February 2020

Mark A. Jobling

29

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25468874%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

12

Lynn B Jorde

1 reference

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24 February 2020

3

Daniel Zadik

1 reference

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24 February 2020

10

Berit Myhre Dupuy

1 reference

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24 February 2020

17

Aphrodite Loutradis

1 reference

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24 February 2020

20

Horolma Pamjav

1 reference

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24 February 2020

28

Bruce Winney

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25468874%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

1

Pille Hallast

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25468874%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

11

Heidi A Eriksen

1 reference

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24 February 2020

5

Jon H Wetton

1 reference

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24 February 2020

author name string

Werner Schempp

22

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25468874%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

Matt Sears

23

1 reference

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24 February 2020

Anneleen Van Geystelen

26

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25468874%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

Scott Watkins

27

1 reference

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24 February 2020

Chris Tyler-Smith

25

1 reference

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24 February 2020

publication date

2 December 2014

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25468874%20AND%20SRC:MED&resulttype=core&format=json

Molecular Biology and Evolution

24 February 2020

published in

1 reference

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24 February 2020

volume

32

1 reference

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24 February 2020

issue

3

1 reference

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24 February 2020

page(s)

661-673

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25468874%20AND%20SRC:MED&resulttype=core&format=json

A global analysis of Y-chromosomal haplotype diversity for 23 STR loci

24 February 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

Inter- and intraspecies phylogenetic analyses reveal extensive X-Y gene conversion in the evolution of gametologous sequences of human sex chromosomes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

Mammalian Y chromosomes retain widely expressed dosage-sensitive regulators

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

Gene conversion violates the stepwise mutation model for microsatellites in y-chromosomal palindromic repeats

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

Recent radiation within Y-chromosomal haplogroup R-M269 resulted in high Y-STR haplotype resemblance.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

The 'extremely ancient' chromosome that isn't: a forensic bioinformatic investigation of Albert Perry's X-degenerate portion of the Y chromosome

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

Natural selection reduced diversity on human y chromosomes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

An unbiased resource of novel SNP markers provides a new chronology for the human Y chromosome and reveals a deep phylogenetic structure in Africa

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

Seeing the wood for the trees: a minimal reference phylogeny for the human Y chromosome

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

Recombination dynamics of a human Y-chromosomal palindrome: rapid GC-biased gene conversion, multi-kilobase conversion tracts, and rare inversions

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

Low-pass DNA sequencing of 1200 Sardinians reconstructs European Y-chromosome phylogeny

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

Sequencing Y chromosomes resolves discrepancy in time to common ancestor of males versus females

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

A comparison of Y-chromosomal lineage dating using either resequencing or Y-SNP plus Y-STR genotyping

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

Updating the Y-chromosomal phylogenetic tree for forensic applications based on whole genome SNPs.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

An African American paternal lineage adds an extremely ancient root to the human Y chromosome phylogenetic tree

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

AMY-tree: an algorithm to use whole genome SNP calling for Y chromosomal phylogenetic applications

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

A calibrated human Y-chromosomal phylogeny based on resequencing

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

Discovery of Western European R1b1a2 Y chromosome variants in 1000 genomes project data: an online community approach

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

wANNOVAR: annotating genetic variants for personal genomes via the web.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

Inheritance of coronary artery disease in men: an analysis of the role of the Y chromosome

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

The peopling of Europe and the cautionary tale of Y chromosome lineage R-M269

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

A new future of forensic Y-chromosome analysis: rapidly mutating Y-STRs for differentiating male relatives and paternal lineages

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

Reconstructing the Indian origin and dispersal of the European Roma: a maternal genetic perspective

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

A map of human genome variation from population-scale sequencing

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

Mutability of Y-chromosomal microsatellites: rates, characteristics, molecular bases, and forensic implications.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

Remarkably little variation in proteins encoded by the Y chromosome's single-copy genes, implying effective purifying selection.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

Footprints of X-to-Y gene conversion in recent human evolution

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

Human Y chromosome base-substitution mutation rate measured by direct sequencing in a deep-rooting pedigree

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

Extended Y chromosome haplotypes resolve multiple and unique lineages of the Jewish priesthood

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

Gene conversion between the X chromosome and the male-specific region of the Y chromosome at a translocation hotspot

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

Genetic and demographic implications of the Bantu expansion: insights from human paternal lineages

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

Association of Y chromosome haplogroup I with HIV progression, and HAART outcome.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

Genomic complexity of the Y-STR DYS19: inversions, deletions and founder lineages carrying duplications

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

Dynamic nature of the proximal AZFc region of the human Y chromosome: multiple independent deletion and duplication events revealed by microsatellite analysis

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

New binary polymorphisms reshape and increase resolution of the human Y chromosomal haplogroup tree

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

BEAST: Bayesian evolutionary analysis by sampling trees

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

Africans in Yorkshire? The deepest-rooting clade of the Y phylogeny within an English genealogy

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

Structural variation on the short arm of the human Y chromosome: recurrent multigene deletions encompassing Amelogenin Y

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

High mutation rates have driven extensive structural polymorphism among human Y chromosomes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

Comparative analysis of chimpanzee and human Y chromosomes unveils complex evolutionary pathway.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

Bayesian coalescent inference of past population dynamics from molecular sequences

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

Dynamics of a human interparalog gene conversion hotspot

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

The effective mutation rate at Y chromosome short tandem repeats, with application to human population-divergence time

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

The human Y chromosome: an evolutionary marker comes of age

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

Abundant gene conversion between arms of palindromes in human and ape Y chromosomes.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

A nomenclature system for the tree of human Y-chromosomal binary haplogroups

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

Y chromosome sequence variation and the history of human populations

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

mtDNA variation among Greenland Eskimos: the edge of the Beringian expansion

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

Median-joining networks for inferring intraspecific phylogenies

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

Ancestral Asian source(s) of new world Y-chromosome founder haplotypes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

Origin and evolution of Native American mtDNA variation: a reappraisal

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

An evaluation of genetic distances for use with microsatellite loci.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

Genetic absolute dating based on microsatellites and the origin of modern humans

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

A recent common ancestry for human Y chromosomes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4327154

6 July 2018

Identifiers

DOI

10.1093/MOLBEV/MSU327

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25468874%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25468874%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

PubMed publication ID

25468874

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25468874%20AND%20SRC:MED&resulttype=core&format=json