(Q34474135)

2 August 2017

title

Human single-nucleotide polymorphisms alter p53 sequence-specific binding at gene regulatory elements (English)

1 reference

single-nucleotide polymorphism

2 August 2017

main subject

1 reference

2

Xuting Wang

1 reference

2 August 2017

1

Omari J Bandele

1 reference

2 August 2017

Douglas A Bell

5

0 references

author name string

Michelle R Campbell

series ordinal

3

1 reference

2 August 2017

Gary S Pittman

series ordinal

4

1 reference

2 August 2017

language of work or name

English

0 references

publication date

3 September 2010

1 reference

2 August 2017

published in

Nucleic Acids Research

1 reference

2 August 2017

volume

39

1 reference

2 August 2017

issue

1

1 reference

2 August 2017

page(s)

178-189

1 reference

Creative Commons Attribution-NonCommercial 2.5 Generic

2 August 2017

copyright license

start time

7 November 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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Divergent evolution of human p53 binding sites: cell cycle versus apoptosis

6 July 2018

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Sequence analysis of p53 response-elements suggests multiple binding modes of the p53 tetramer to DNA targets

6 July 2018

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Identification of polymorphic antioxidant response elements in the human genome

6 July 2018

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Changing the p53 master regulatory network: ELEMENTary, my dear Mr Watson

6 July 2018

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Functional analysis of p53 binding under differential stresses

6 July 2018

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Acetylation of mouse p53 at lysine 317 negatively regulates p53 apoptotic activities after DNA damage

6 July 2018

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A SNP in the flt-1 promoter integrates the VEGF system into the p53 transcriptional network

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6 July 2018

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The up-regulation of proteasome subunits and lysosomal proteases in hepatocellular carcinomas of the HBx gene knockin transgenic mice

6 July 2018

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Renewed interest in cancer immunotherapy with the tumor necrosis factor superfamily molecules

6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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Staf50 is a novel p53 target gene conferring reduced clonogenic growth of leukemic U-937 cells.

6 July 2018

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Unbiased mapping of transcription factor binding sites along human chromosomes 21 and 22 points to widespread regulation of noncoding RNAs

6 July 2018

1 reference

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p53 Functions through Stress- and Promoter-Specific Recruitment of Transcription Initiation Components before and after DNA Damage

6 July 2018

1 reference

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A promoter SNP (-1323T>C) in G-substrate gene (GSBS) correlates with hypercholesterolemia

6 July 2018

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Experimental validation of novel and conventional approaches to quantitative real-time PCR data analysis

6 July 2018

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6 July 2018

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Tissue-specific induction of p53 targets in vivo.

6 July 2018

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Differential transactivation by the p53 transcription factor is highly dependent on p53 level and promoter target sequence.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3017610

Evolution of transcription factor binding sites in Mammalian gene regulatory regions: conservation and turnover

6 July 2018

1 reference

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Allele-specific binding of the ubiquitous transcription factor OCT-1 to the functional single nucleotide polymorphism (SNP) sites in the tumor necrosis factor-alpha gene (TNFA) promoter

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3017610

Phosphorylation of murine p53 at ser-18 regulates the p53 responses to DNA damage

6 July 2018

1 reference

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p53 transcriptional activity is essential for p53-dependent apoptosis following DNA damage

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3017610

Analysis of p53-regulated gene expression patterns using oligonucleotide arrays

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3017610

Point mutations within 663-666 bp of intron 6 of the human TDO2 gene, associated with a number of psychiatric disorders, damage the YY-1 transcription factor binding site.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3017610

Increased prosomal proteins in breast cancer cells and in neighboring normal cells in Parsi and non-Parsi populations

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3017610

Prosomes (proteasomes) changes during differentiation are related to the type of inducer

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3017610

An Alu element in the myeloperoxidase promoter contains a composite SP1-thyroid hormone-retinoic acid response element

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3017610

Sequence-specific transcriptional activation is essential for growth suppression by p53.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3017610

p53 tagged sites from human genomic DNA.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3017610

A transcriptionally active DNA-binding site for human p53 protein complexes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3017610

Definition of a consensus binding site for p53

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3017610

Chromatin immunoprecipitation-on-chip reveals stress-dependent p53 occupancy in primary normal cells but not in established cell lines.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3017610

Algorithm for prediction of tumour suppressor p53 affinity for binding sites in DNA.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3017610

Expression of the IFN-inducible p53-target gene TRIM22 is down-regulated during erythroid differentiation of human bone marrow.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3017610

Bilirubin UDP-glucuronosyltransferase 1A1 (UGT1A1) gene promoter polymorphisms and HPRT, glycophorin A, and micronuclei mutant frequencies in human blood

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3017610

Polymorphisms in the P450 c17 (17-hydroxylase/17,20-Lyase) and P450 c19 (aromatase) genes: association with serum sex steroid concentrations and bone mineral density in postmenopausal women

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3017610

The NEDD8 pathway is required for proteasome-mediated degradation of human estrogen receptor (ER)-alpha and essential for the antiproliferative activity of ICI 182,780 in ERalpha-positive breast cancer cells

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3017610

Identification of a defect in the UGT1A1 gene promoter and its association with hyperbilirubinemia

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3017610

A polymorphism that affects OCT-1 binding to the TNF promoter region is associated with severe malaria

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3017610

Transcriptional activation by p53 correlates with suppression of growth but not transformation.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3017610

27 October 2018

Wanted: regulatory SNPs

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20817676

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

A promoter that acquired p53 responsiveness during primate evolution

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20817676

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKQ764

1 reference

journals/nar/BandeleWCPB11

2 August 2017

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

2 August 2017

1 reference