(Q34476078)

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Transcriptome de novo assembly from next-generation sequencing and comparative analyses in the hexaploid salt marsh species Spartina maritima and Spartina alterniflora (Poaceae).

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17 February 2020

Transcriptome de novo assembly from next-generation sequencing and comparative analyses in the hexaploid salt marsh species Spartina maritima and Spartina alterniflora (Poaceae) (English)

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17 February 2020

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Spartina alterniflora

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Spartina maritima

object named as

Spartina maritima

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Julie Ferreira de Carvalho

1

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17 February 2020

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17 February 2020

Corinne Da Silva

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17 February 2020

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P Wincker

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17 February 2020

S Michon-Coudouel

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17 February 2020

A Dheilly

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D Naquin

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17 February 2020

J Boutte

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17 February 2020

A Salmon

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17 February 2020

M Ainouche

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17 February 2020

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14 November 2012

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17 February 2020

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13

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full work available at URL

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3554450

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21 March 2022

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17 February 2020

110

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17 February 2020

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17 February 2020

181-193

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17 February 2020

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WikiProject Invasion Biology

0 references

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Homoeolog expression bias and expression level dominance in allopolyploid cotton

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Transcriptomic analysis of grain amaranth (Amaranthus hypochondriacus) using 454 pyrosequencing: comparison with A. tuberculatus, expression profiling in stems and in response to biotic and abiotic stress

1 reference

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Differential expression of the transcripts of Spartina alterniflora Loisel (smooth cordgrass) induced in response to petroleum hydrocarbon

1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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6 July 2018

Transcriptome divergence between the hexaploid salt-marsh sister species Spartina maritima and Spartina alterniflora (Poaceae).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3554450

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1 reference

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Characterization of duplicate gene evolution in the recent natural allopolyploid Tragopogon miscellus by next-generation sequencing and Sequenom iPLEX MassARRAY genotyping.

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1 reference

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Homeolog loss and expression changes in natural populations of the recently and repeatedly formed allotetraploid Tragopogon mirus (Asteraceae)

1 reference

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1 reference

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Homoeologous recombination in allopolyploids: the polyploid ratchet

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Genetic regulation of meiosis in polyploid species: new insights into an old question

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Applications of new sequencing technologies for transcriptome analysis.

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On the road to diploidization? Homoeolog loss in independently formed populations of the allopolyploid Tragopogon miscellus (Asteraceae)

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6 July 2018

Circos: an information aesthetic for comparative genomics

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Diversity in leaf anatomy, and stomatal distribution and conductance, between salt marsh and freshwater species in the C(4) genus Spartina (Poaceae).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3554450

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1 reference

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Mechanisms of salinity tolerance

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6 July 2018

Primary responses to salt stress in a halophyte, smooth cordgrass (Spartina alterniflora Loisel.).

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SNP discovery via 454 transcriptome sequencing

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21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

Base-calling of automated sequencer traces using phred. I. Accuracy assessment

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21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

Rapid structural and epigenetic reorganization near transposable elements in hybrid and allopolyploid genomes in Spartina.

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21 January 2018

Genetic and epigenetic consequences of recent hybridization and polyploidy in Spartina (Poaceae).

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21 January 2018

Homoeologous nonreciprocal recombination in polyploid cotton.

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21 January 2018

C4 photosynthesis in plants from cool temperate regions, with particular reference to Spartina townsendii

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21 January 2018

Retrotransposons and genomic stability in populations of the young allopolyploid species Spartina anglica C.E. Hubbard (Poaceae)

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Comparative analyses reveal high levels of conserved colinearity between the finger millet and rice genomes

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12 December 2020

based on heuristic

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Uniformity of the nuclear and chloroplast genomes of Spartina maritima (Poaceae), a salt-marsh species in decline along the Western European Coast

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12 December 2020

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A comparative transcriptomic study of an allotetraploid and its diploid progenitors illustrates the unique advantages and challenges of RNA-seq in plant species

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12 December 2020

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Nucleation and Facilitation in Saltmarsh Succession: Interactions between Spartina Maritima and Arthrocnemum Perenne

1 reference

https://api.crossref.org/works/10.1038%2FHDY.2012.76

7 January 2021

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In situ biogenic silica variations in the invasive salt marsh plant, Spartina alterniflora: A possible link with environmental stress

1 reference

https://api.crossref.org/works/10.1038%2FHDY.2012.76

7 January 2021

based on heuristic

inferred from DOI database lookup

Identifiers

10.1038/HDY.2012.76

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Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23149455%20AND%20SRC:MED&resulttype=core&format=json

17 February 2020

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1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23149455%20AND%20SRC:MED&resulttype=core&format=json

17 February 2020

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23149455%20AND%20SRC:MED&resulttype=core&format=json

17 February 2020

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