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A two-step site and mRNA-level model for predicting microRNA targets
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Europe PubMed Central
PMC publication ID
3019229
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21194446%20AND%20SRC:MED&resulttype=core&format=json
retrieved
19 January 2020
title
A two-step site and mRNA-level model for predicting microRNA targets
(English)
1 reference
stated in
Europe PubMed Central
PMC publication ID
3019229
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21194446%20AND%20SRC:MED&resulttype=core&format=json
retrieved
19 January 2020
main subject
microRNA
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author
Pål Sætrom
series ordinal
2
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Europe PubMed Central
PMC publication ID
3019229
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21194446%20AND%20SRC:MED&resulttype=core&format=json
retrieved
19 January 2020
author name string
Takaya Saito
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMC publication ID
3019229
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21194446%20AND%20SRC:MED&resulttype=core&format=json
retrieved
19 January 2020
publication date
31 December 2010
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Europe PubMed Central
PMC publication ID
3019229
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21194446%20AND%20SRC:MED&resulttype=core&format=json
retrieved
19 January 2020
published in
BMC Bioinformatics
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Europe PubMed Central
PMC publication ID
3019229
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21194446%20AND%20SRC:MED&resulttype=core&format=json
retrieved
19 January 2020
volume
11
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stated in
Europe PubMed Central
PMC publication ID
3019229
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21194446%20AND%20SRC:MED&resulttype=core&format=json
retrieved
19 January 2020
page(s)
612
1 reference
stated in
Europe PubMed Central
PMC publication ID
3019229
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21194446%20AND%20SRC:MED&resulttype=core&format=json
retrieved
19 January 2020
copyright license
Creative Commons Attribution 2.0 Generic
start time
1 December 2010
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April 2022 Public Data File from Crossref
copyright status
copyrighted
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April 2022 Public Data File from Crossref
exact match
https://scigraph.springernature.com/pub.10.1186/1471-2105-11-612
0 references
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6 July 2018
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Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps
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Transfection of small RNAs globally perturbs gene regulation by endogenous microRNAs
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6 July 2018
MicroRNAs: target recognition and regulatory functions
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6 July 2018
Widespread changes in protein synthesis induced by microRNAs
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6 July 2018
The impact of microRNAs on protein output
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6 July 2018
A biochemical approach to identifying microRNA targets
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6 July 2018
miRBase: tools for microRNA genomics
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6 July 2018
The role of site accessibility in microRNA target recognition
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6 July 2018
MicroRNA targeting specificity in mammals: determinants beyond seed pairing
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6 July 2018
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Distance constraints between microRNA target sites dictate efficacy and cooperativity
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6 July 2018
Transcripts targeted by the microRNA-16 family cooperatively regulate cell cycle progression
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6 July 2018
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6 July 2018
microRNA target predictions in animals
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6 July 2018
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6 July 2018
3' UTR seed matches, but not overall identity, are associated with RNAi off-targets
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6 July 2018
Animal MicroRNAs confer robustness to gene expression and have a significant impact on 3'UTR evolution
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6 July 2018
ROCR: visualizing classifier performance in R
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6 July 2018
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6 July 2018
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PubMed Central
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6 July 2018
Microarray analysis shows that some microRNAs downregulate large numbers of target mRNAs
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019229
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6 July 2018
The functions of animal microRNAs
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019229
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6 July 2018
Aligning multiple genomic sequences with the threaded blockset aligner
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019229
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6 July 2018
MicroRNAs: genomics, biogenesis, mechanism, and function
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019229
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6 July 2018
MicroRNA targets in Drosophila
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019229
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6 July 2018
Prediction of mammalian microRNA targets
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019229
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6 July 2018
siRNAs can function as miRNAs
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019229
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6 July 2018
EMBOSS: the European Molecular Biology Open Software Suite
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PubMed Central
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6 July 2018
RNAi: double-stranded RNA directs the ATP-dependent cleavage of mRNA at 21 to 23 nucleotide intervals
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019229
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6 July 2018
A species of small antisense RNA in posttranscriptional gene silencing in plants
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019229
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6 July 2018
Prediction of both conserved and nonconserved microRNA targets in animals.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019229
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27 October 2018
Potent effect of target structure on microRNA function.
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PubMed Central
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27 October 2018
Use of receiver operating characteristic (ROC) analysis to evaluate sequence matching
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019229
retrieved
27 October 2018
Identifiers
DOI
10.1186/1471-2105-11-612
1 reference
stated in
Europe PubMed Central
PMC publication ID
3019229
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21194446%20AND%20SRC:MED&resulttype=core&format=json
retrieved
19 January 2020
DBLP publication ID
journals/bmcbi/SaitoS10
1 reference
stated in
DBLP Dataset 2021-01-02
retrieved
28 January 2021
Dimensions Publication ID
1042577766
0 references
PMC publication ID
3019229
1 reference
stated in
Europe PubMed Central
PMC publication ID
3019229
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21194446%20AND%20SRC:MED&resulttype=core&format=json
retrieved
19 January 2020
PubMed publication ID
21194446
1 reference
stated in
Europe PubMed Central
PMC publication ID
3019229
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21194446%20AND%20SRC:MED&resulttype=core&format=json
retrieved
19 January 2020
ResearchGate publication ID
49717549
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