(Q34483774)

English

Transcriptomic and phenotypic analyses identify coregulated, overlapping regulons among PrfA, CtsR, HrcA, and the alternative sigma factors sigmaB, sigmaC, sigmaH, and sigmaL in Listeria monocytogenes

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scholarly article

1 reference

Europe PubMed Central

2 August 2017

Transcriptomic and phenotypic analyses identify coregulated, overlapping regulons among PrfA, CtsR, HrcA, and the alternative sigma factors sigmaB, sigmaC, sigmaH, and sigmaL in Listeria monocytogenes (English)

1 reference

Europe PubMed Central

2 August 2017

Listeria monocytogenes

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Soraya Chaturongakul

object named as

Soraya Chaturongakul

1

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Teresa M Bergholz

object named as

Teresa M Bergholz

4

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object named as

Kathryn J Boor

9

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Martin Wiedmann

object named as

Martin Wiedmann

8

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author name string

Sarita Raengpradub

2

1 reference

Europe PubMed Central

2 August 2017

M Elizabeth Palmer

3

1 reference

Europe PubMed Central

2 August 2017

Renato H Orsi

5

1 reference

Europe PubMed Central

2 August 2017

Yuewei Hu

6

1 reference

Europe PubMed Central

2 August 2017

Juliane Ollinger

7

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Europe PubMed Central

2 August 2017

language of work or name

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publication date

29 October 2010

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Europe PubMed Central

2 August 2017

Applied and Environmental Microbiology

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Europe PubMed Central

2 August 2017

77

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Europe PubMed Central

2 August 2017

187-200

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Europe PubMed Central

2 August 2017

1

1 reference

Europe PubMed Central

2 August 2017

describes a project that uses

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Europe PubMed Central

22 June 2022

https://europepmc.org/article/PMC/3019704

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Transcriptomic and phenotypic characterization of a Bacillus subtilis strain without extracytoplasmic function σ factors.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019704

6 July 2018

Patterns of subnet usage reveal distinct scales of regulation in the transcriptional regulatory network of Escherichia coli

1 reference

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6 July 2018

Listeria monocytogenes {sigma}B has a small core regulon and a conserved role in virulence but makes differential contributions to stress tolerance across a diverse collection of strains.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019704

6 July 2018

Defining a role for Hfq in Gram-positive bacteria: evidence for Hfq-dependent antisense regulation in Listeria monocytogenes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019704

6 July 2018

In vivo transcriptional profiling of Listeria monocytogenes and mutagenesis identify new virulence factors involved in infection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019704

6 July 2018

The Listeria transcriptional landscape from saprophytism to virulence.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019704

6 July 2018

Listeria monocytogenes sigmaB modulates PrfA-mediated virulence factor expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019704

6 July 2018

Differential regulation of Listeria monocytogenes internalin and internalin-like genes by sigmaB and PrfA as revealed by subgenomic microarray analyses

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019704

6 July 2018

Contributions of two-component regulatory systems, alternative sigma factors, and negative regulators to Listeria monocytogenes cold adaptation and cold growth

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019704

6 July 2018

Temporal transcriptomic analysis of the Listeria monocytogenes EGD-e sigmaB regulon

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019704

6 July 2018

A viable Bacillus subtilis strain without functional extracytoplasmic function sigma genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019704

6 July 2018

Comparative analysis of the sigma B-dependent stress responses in Listeria monocytogenes and Listeria innocua strains exposed to selected stress conditions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019704

6 July 2018

Transcriptomic and phenotypic analyses suggest a network between the transcriptional regulators HrcA and sigmaB in Listeria monocytogenes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019704

6 July 2018

Phenotypic and transcriptomic analyses demonstrate interactions between the transcriptional regulators CtsR and Sigma B in Listeria monocytogenes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019704

6 July 2018

Microarray-based characterization of the Listeria monocytogenes cold regulon in log- and stationary-phase cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019704

6 July 2018

The tyrosine kinase McsB is a regulated adaptor protein for ClpCP

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019704

6 July 2018

Temperature-dependent expression of Listeria monocytogenes internalin and internalin-like genes suggests functional diversity of these proteins among the listeriae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019704

6 July 2018

The alternative sigma factor sigma B and the virulence gene regulator PrfA both regulate transcription of Listeria monocytogenes internalins.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019704

6 July 2018

Listeria monocytogenes flagella are used for motility, not as adhesins, to increase host cell invasion

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019704

6 July 2018

Exposure to salt and organic acids increases the ability of Listeria monocytogenes to invade Caco-2 cells but decreases its ability to survive gastric stress

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019704

6 July 2018

Identification of small Hfq-binding RNAs in Listeria monocytogenes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019704

6 July 2018

Linear models and empirical bayes methods for assessing differential expression in microarray experiments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019704

6 July 2018

Insights into transcriptional regulation and sigma competition from an equilibrium model of RNA polymerase binding to DNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019704

6 July 2018

Sigma B contributes to Listeria monocytogenes gastrointestinal infection but not to systemic spread in the guinea pig infection model

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019704

6 July 2018

Alternative sigma factors and their roles in bacterial virulence

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019704

6 July 2018

Functional consequences of genome evolution in Listeria monocytogenes: the lmo0423 and lmo0422 genes encode sigmaC and LstR, a lineage II-specific heat shock system

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019704

6 July 2018

SigmaB contributes to Listeria monocytogenes invasion by controlling expression of inlA and inlB.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019704

6 July 2018

Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019704

6 July 2018

A tyrosine kinase and its activator control the activity of the CtsR heat shock repressor in B. subtilis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019704

6 July 2018

SigB-dependent in vitro transcription of prfA and some newly identified genes of Listeria monocytogenes whose expression is affected by PrfA in vivo

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019704

6 July 2018

Listeria monocytogenes sigmaB contributes to invasion of human intestinal epithelial cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019704

6 July 2018

Bioconductor: open software development for computational biology and bioinformatics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019704

6 July 2018

RsbT and RsbV contribute to sigmaB-dependent survival under environmental, energy, and intracellular stress conditions in Listeria monocytogenes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019704

6 July 2018

A novel mutation within the central Listeria monocytogenes regulator PrfA that results in constitutive expression of virulence gene products

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019704

6 July 2018

Listeria monocytogenes regulates flagellar motility gene expression through MogR, a transcriptional repressor required for virulence

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019704

6 July 2018

The RNA-binding protein Hfq of Listeria monocytogenes: role in stress tolerance and virulence

1 reference

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6 July 2018

Global analysis of gene expression in an rpoN mutant of Listeria monocytogenes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019704

6 July 2018

Disruption of putative regulatory loci in Listeria monocytogenes demonstrates a significant role for Fur and PerR in virulence

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019704

6 July 2018

Listeria monocytogenes sigma B regulates stress response and virulence functions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019704

6 July 2018

Role of Listeria monocytogenes σ B in Survival of Lethal Acidic Conditions and in the Acquired Acid Tolerance Response

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019704

6 July 2018

Binding of sigma(A) and sigma(B) to core RNA polymerase after environmental stress in Bacillus subtilis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019704

6 July 2018

Sigma B contributes to PrfA-mediated virulence in Listeria monocytogenes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019704

6 July 2018

Lysergic acid diethylamide- and mescaline-induced attenuation of the effect of punishment in the rat

1 reference

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6 July 2018

Role of sigma(B) in heat, ethanol, acid, and oxidative stress resistance and during carbon starvation in Listeria monocytogenes

1 reference

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6 July 2018

A hierarchical unsupervised growing neural network for clustering gene expression patterns

1 reference

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6 July 2018

Clp-mediated proteolysis in Gram-positive bacteria is autoregulated by the stability of a repressor

1 reference

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1 reference

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6 July 2018

Cloning, sequencing, and transcriptional analysis of the dnaK heat shock operon of Listeria monocytogenes

1 reference

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6 July 2018

Replacement of vegetative sigmaA by sporulation-specific sigmaF as a component of the RNA polymerase holoenzyme in sporulating Bacillus subtilis

1 reference

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6 July 2018

The yvyD gene of Bacillus subtilis is under dual control of sigmaB and sigmaH.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019704

6 July 2018

Identification of the gene encoding the alternative sigma factor sigmaB from Listeria monocytogenes and its role in osmotolerance

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019704

6 July 2018

General stress transcription factor sigmaB and its role in acid tolerance and virulence of Listeria monocytogenes

1 reference

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6 July 2018

The GroE chaperonin machine is a major modulator of the CIRCE heat shock regulon of Bacillus subtilis

1 reference

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6 July 2018

Regulation of the prfA transcriptional activator of Listeria monocytogenes: multiple promoter elements contribute to intracellular growth and cell-to-cell spread

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019704

6 July 2018

Listeria monocytogenes--a model system for studying the pathomechanisms of an intracellular microorganism

1 reference

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6 July 2018

Introduction of pAM beta 1 into Listeria monocytogenes by conjugation and homology between native L. monocytogenes plasmids

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019704

6 July 2018

The alternative sigma factor sigma(L) of L. monocytogenes promotes growth under diverse environmental stresses.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019704

27 October 2018

The Spx paralogue MgsR (YqgZ) controls a subregulon within the general stress response of Bacillus subtilis.

1 reference

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27 October 2018

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1 reference

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27 October 2018

Characterization of a spontaneous, pressure-tolerant Listeria monocytogenes Scott A ctsR deletion mutant.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3019704

27 October 2018

sigmaB-dependent gene induction and expression in Listeria monocytogenes during osmotic and acid stress conditions simulating the intestinal environment

1 reference

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27 October 2018

Comparative genomic analysis of the sigB operon in Listeria monocytogenes and in other Gram-positive bacteria.

1 reference

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27 October 2018

The CtsR regulator of Listeria monocytogenes contains a variant glycine repeat region that affects piezotolerance, stress resistance, motility and virulence.

1 reference

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27 October 2018

Transcriptome analysis of Listeria monocytogenes identifies three groups of genes differently regulated by PrfA.

1 reference

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27 October 2018

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27 October 2018

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1 reference

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27 October 2018

Contributions of Listeria monocytogenes B and PrfA to expression of virulence and stress response genes during extra- and intracellular growth

1 reference

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9 December 2018

The Listeria monocytogenes prfAP2 promoter is regulated by sigma B in a growth phase dependent manner

1 reference

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9 December 2018

CtsR controls class III heat shock gene expression in the human pathogen Listeria monocytogenes

1 reference

https://pubmed.ncbi.nlm.nih.gov/21037293

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Induction of sigma(B)-dependent general stress genes by amino acid starvation in a spo0H mutant of Bacillus subtilis

1 reference

https://pubmed.ncbi.nlm.nih.gov/21037293

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Adoptive transfer of immunity to Listeria monocytogenes. The influence of in vitro stimulation on lymphocyte subset requirements

1 reference

https://pubmed.ncbi.nlm.nih.gov/21037293

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1128/AEM.00952-10

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Europe PubMed Central

2 August 2017

1 reference

Europe PubMed Central

2 August 2017

1 reference

Europe PubMed Central

2 August 2017

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