(Q34523345)

2 August 2017

title

Testing three pipelines for 18S rDNA-based metabarcoding of soil faunal diversity (English)

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2 August 2017

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ChenXue Yang

1

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2 August 2017

YingQiu Ji

2

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2 August 2017

XiaoYang Wang

3

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2 August 2017

ChunYang Yang

4

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2 August 2017

Douglas W Yu

5

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2 August 2017

publication date

27 December 2012

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Science in China. Series C: Life Sciences

2 August 2017

published in

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2 August 2017

volume

56

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2 August 2017

issue

1

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2 August 2017

page(s)

73-81

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Search and clustering orders of magnitude faster than BLAST

2 August 2017

cites work

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QIIME allows analysis of high-throughput community sequencing data

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Molecular study of worldwide distribution and diversity of soil animals

21 January 2018

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Tracking earthworm communities from soil DNA.

21 January 2018

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New environmental metabarcodes for analysing soil DNA: potential for studying past and present ecosystems

21 January 2018

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Ecometagenetics confirm high tropical rainforest nematode diversity

21 January 2018

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Evaluating high-throughput sequencing as a method for metagenomic analysis of nematode diversity.

21 January 2018

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Reproducibility of read numbers in high-throughput sequencing analysis of nematode community composition and structure

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21 January 2018

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21 January 2018

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Simple approach to reduce PCR artefact formation leads to reliable genotyping of MHC and other highly polymorphic loci--implications for evolutionary analysis

21 January 2018

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Bioinformatic challenges for DNA metabarcoding of plants and animals

21 January 2018

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Soil sampling and isolation of extracellular DNA from large amount of starting material suitable for metabarcoding studies.

21 January 2018

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DNA from soil mirrors plant taxonomic and growth form diversity

21 January 2018

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Ultrasequencing of the meiofaunal biosphere: practice, pitfalls and promises.

21 January 2018

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UCHIME improves sensitivity and speed of chimera detection

21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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Quantifying microbial communities with 454 pyrosequencing: does read abundance count?

21 January 2018

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A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood

21 January 2018

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21 January 2018

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PyNAST: a flexible tool for aligning sequences to a template alignment

21 January 2018

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pplacer: linear time maximum-likelihood and Bayesian phylogenetic placement of sequences onto a fixed reference tree

21 January 2018

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Surveying soil faunal communities using a direct molecular approach

21 January 2018

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Biodiversity soup: metabarcoding of arthropods for rapid biodiversity assessment and biomonitoring

21 January 2018

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10.1007/S11427-012-4423-7

21 January 2018

Identifiers

DOI

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Dimensions Publication ID

2 August 2017

1045004963

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1 reference