(Q34536821)

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Development of an integrated transcript sequence database and a gene expression atlas for gene discovery and analysis in switchgrass (Panicum virgatum L.).

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2 August 2017

Development of an integrated transcript sequence database and a gene expression atlas for gene discovery and analysis in switchgrass (Panicum virgatum L.). (English)

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2 August 2017

Panicum virgatum

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Erika Lindquist

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Erika Lindquist

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12

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Jane Grimwood

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2 August 2017

Laura E. Bartley

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Laura E Bartley

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Yuhong Tang

21

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Michael Udvardi

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Michael K Udvardi

22

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Jeremy Schmutz

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2 August 2017

18

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Pamela C Ronald

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2 August 2017

16

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Rita Sharma

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2 August 2017

Christa Pennacchio

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Christa Pennacchio

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2 August 2017

author name string

Ji-Yi Zhang

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2 August 2017

Yi-Ching Lee

2

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2 August 2017

Ivone Torres-Jerez

3

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2 August 2017

Mingyi Wang

4

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2 August 2017

Yanbin Yin

5

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2 August 2017

Wen-Chi Chou

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2 August 2017

Ji He

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2 August 2017

Hui Shen

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2 August 2017

Avinash C Srivastava

9

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2 August 2017

Ying Xu

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2 August 2017

Manoj Sharma

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2 August 2017

Malay C Saha

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2 August 2017

Richard A Dixon

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2 August 2017

publication date

18 February 2013

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2 August 2017

The Plant Journal

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2 August 2017

74

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2 August 2017

1

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2 August 2017

160-173

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2 August 2017

Palaeogenomics of plants: synteny-based modelling of extinct ancestors

1 reference

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A gene expression atlas of the model legume Medicago truncatula.

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Nuclear DNA Amounts in Angiosperms and their Modern Uses—807 New Estimates

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Lignin biosynthesis

1 reference

https://api.crossref.org/works/10.1111%2FTPJ.12104

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Molecular breeding of switchgrass for use as a biofuel crop

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Reciprocal silencing, transcriptional bias and functional divergence of homeologs in polyploid cotton (gossypium)

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Using the miraEST assembler for reliable and automated mRNA transcript assembly and SNP detection in sequenced ESTs

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Overexpression of the maize Corngrass1 microRNA prevents flowering, improves digestibility, and increases starch content of switchgrass

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Genome-wide identification and testing of superior reference genes for transcript normalization in Arabidopsis

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Genetic manipulation of lignin reduces recalcitrance and improves ethanol production from switchgrass

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Downregulation of caffeic acid 3-O-methyltransferase and caffeoyl CoA 3-O-methyltransferase in transgenic alfalfa. impacts on lignin structure and implications for the biosynthesis of G and S lignin

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Exploration, normalization, and summaries of high density oligonucleotide array probe level data

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Switchgrass for bioethanol and other value-added applications: a review

1 reference

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Comparing de novo assemblers for 454 transcriptome data

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CDD: a curated Entrez database of conserved domain alignments

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PANTHER version 7: improved phylogenetic trees, orthologs and collaboration with the Gene Ontology Consortium

1 reference

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A Revised Medium for Rapid Growth and Bio Assays with Tobacco Tissue Cultures

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Complete switchgrass genetic maps reveal subgenome collinearity, preferential pairing and multilocus interactions

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The TIGR Rice Genome Annotation Resource: improvements and new features

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The Sorghum bicolor genome and the diversification of grasses

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TIGR Gene Indices clustering tools (TGICL): a software system for fast clustering of large EST datasets

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Downregulation of cinnamyl-alcohol dehydrogenase in switchgrass by RNA silencing results in enhanced glucose release after cellulase treatment

1 reference

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Net energy of cellulosic ethanol from switchgrass

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A gene expression map of Arabidopsis thaliana development

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Genome-wide atlas of transcription during maize development.

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Advances in modifying lignin for enhanced biofuel production

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PAVE: program for assembling and viewing ESTs

1 reference

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21 January 2018

Genome sequencing and analysis of the model grass Brachypodium distachyon

1 reference

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21 January 2018

Analysis of expressed sequence tags and the identification of associated short tandem repeats in switchgrass.

1 reference

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21 January 2018

Five nuclear loci resolve the polyploid history of switchgrass (Panicum virgatum L.) and relatives

1 reference

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Lignin biosynthesis and structure

1 reference

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21 January 2018

A dynamic gene expression atlas covering the entire life cycle of rice.

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Development of 1,030 genomic SSR markers in switchgrass

1 reference

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GMAP: a genomic mapping and alignment program for mRNA and EST sequences

1 reference

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21 January 2018

Silencing of 4-coumarate:coenzyme A ligase in switchgrass leads to reduced lignin content and improved fermentable sugar yields for biofuel production

1 reference

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Plants to power: bioenergy to fuel the future

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Simple cDNA normalization using kamchatka crab duplex-specific nuclease

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Identifiers

10.1111/TPJ.12104

1 reference

Europe PubMed Central

PubMed publication ID

2 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

2 August 2017

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