(Q34537153)

2 August 2017

title

Comparative genomics of the vertebrate insulin/TOR signal transduction pathway: a network-level analysis of selective pressures (English)

1 reference

Montserrat Aguadé i Porres

2 August 2017

1 reference

1 reference

David Alvarez-Ponce

1

0 references

Julio Rozas

object named as

Julio Rozas

series ordinal

3

0 references

object named as

Montserrat Aguadé

series ordinal

2

0 references

language of work or name

1 reference

13 December 2010

1 reference

Genome Biology and Evolution

2 August 2017

published in

1 reference

2 August 2017

volume

3

1 reference

2 August 2017

page(s)

87-101

1 reference

The evolution of control and distribution of adaptive mutations in a metabolic pathway

2 August 2017

cites work

1 reference

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7 July 2018

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7 July 2018

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Evolutionary rate patterns of the Gibberellin pathway genes

7 July 2018

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7 July 2018

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7 July 2018

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Network-level molecular evolutionary analysis of the insulin/TOR signal transduction pathway across 12 Drosophila genomes

7 July 2018

1 reference

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High nucleotide divergence in developmental regulatory genes contrasts with the structural elements of olfactory pathways in caenorhabditis

7 July 2018

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The functional repertoires of metazoan genomes

7 July 2018

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Genome analysis of the platypus reveals unique signatures of evolution

7 July 2018

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7 July 2018

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7 July 2018

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Insulin-like signaling, nutrient homeostasis, and life span

7 July 2018

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Genome of the marsupial Monodelphis domestica reveals innovation in non-coding sequences

7 July 2018

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7 July 2018

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Gene expression and protein length influence codon usage and rates of sequence evolution in Populus tremula

7 July 2018

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Inhibition of cytohesins by SecinH3 leads to hepatic insulin resistance

7 July 2018

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PTEN and SHIP2 phosphoinositide phosphatases as negative regulators of insulin signalling.

7 July 2018

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Transcriptional feedback control of insulin receptor by dFOXO/FOXO1.

7 July 2018

1 reference

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Bayes empirical bayes inference of amino acid sites under positive selection

7 July 2018

1 reference

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ProbCons: Probabilistic consistency-based multiple sequence alignment

7 July 2018

1 reference

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Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution

7 July 2018

1 reference

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Accuracy and power of statistical methods for detecting adaptive evolution in protein coding sequences and for identifying positively selected sites

7 July 2018

1 reference

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Finishing the euchromatic sequence of the human genome

7 July 2018

1 reference

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Gene expression intensity shapes evolutionary rates of the proteins encoded by the vertebrate genome

7 July 2018

1 reference

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A general tendency for conservation of protein length across eukaryotic kingdoms

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030423

Duplicated genes evolve slower than singletons despite the initial rate increase

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030423

The functional genomic distribution of protein divergence in two animal phyla: coevolution, genomic conflict, and constraint

7 July 2018

1 reference

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The evolution of molecular genetic pathways and networks

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030423

A gene atlas of the mouse and human protein-encoding transcriptomes

7 July 2018

1 reference

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Genome sequence of the Brown Norway rat yields insights into mammalian evolution

7 July 2018

1 reference

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A genome-wide survey of human pseudogenes

7 July 2018

1 reference

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Insulin/IGF and target of rapamycin signaling: a TOR de force in growth control

7 July 2018

1 reference

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Initial sequencing and comparative analysis of the mouse genome

7 July 2018

1 reference

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Identification and analysis of over 2000 ribosomal protein pseudogenes in the human genome

7 July 2018

1 reference

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Evolutionary rate in the protein interaction network

7 July 2018

1 reference

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Contrasting evolutionary forces in the Arabidopsis thaliana floral developmental pathway

7 July 2018

1 reference

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Large-scale analysis of the human and mouse transcriptomes

7 July 2018

1 reference

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Molecular-functional studies of adaptive genetic variation in prokaryotes and eukaryotes

7 July 2018

1 reference

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The evolutionary fate and consequences of duplicate genes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030423

Codon-substitution models for heterogeneous selection pressure at amino acid sites

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030423

PAML: a program package for phylogenetic analysis by maximum likelihood

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030423

Structural characterization of the mouse ribosomal protein S6-encoding gene

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030423

The coevolution of gene family trees

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030423

Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030423

A codon-based model of nucleotide substitution for protein-coding DNA sequences

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030423

Slightly Deleterious Mutant Substitutions in Evolution

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030423

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030423

Limits of adaptation: the evolution of selective neutrality

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030423

The 'effective number of codons' used in a gene

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030423

Determinants of DNA sequence divergence between Escherichia coli and Salmonella typhimurium: codon usage, map position, and concerted evolution

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030423

Network rigidity and metabolic engineering in metabolite overproduction.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030423

The rapid generation of mutation data matrices from protein sequences

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030423

The mapping of seven intron-containing ribosomal protein genes shows they are unlinked in the human genome

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030423

The organization of the intron-containing human S6 ribosomal protein (rpS6) gene and determination of its location at chromosome 9p21

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030423

Tissue specificity and the human protein interaction network

7 July 2018

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVQ084

Adaptive evolution of metabolic pathways in Drosophila.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVQ084

R: A Language for Data Analysis and Graphics

21 January 2018

1 reference

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Evolution of proteins and gene expression levels are coupled in Drosophila and are independently associated with mRNA abundance, protein length, and number of protein-protein interactions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVQ084

Patterns of variation in the evolution of carotenoid biosynthetic pathway enzymes of higher plants.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVQ084

Evolutionary rate variation in anthocyanin pathway genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVQ084

The correlation of evolutionary rate with pathway position in plant terpenoid biosynthesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVQ084

Contrasting selection pressures on components of the Ras‐mediated signal transduction pathway in Drosophila

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVQ084

Evolution of the isoprene biosynthetic pathway in kudzu

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVQ084

Highly expressed genes in yeast evolve slowly.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030423

The branch point effect. Ultrasensitivity and subsensitivity to metabolic control.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030423

Determinants of substitution rates in mammalian genes: expression pattern affects selection intensity but not mutation rate

27 October 2018

1 reference

12 December 2020

Patterns of evolutionary rate variation among genes of the anthocyanin biosynthetic pathway

1 reference

12 December 2020

Comparative genomics of centrality and essentiality in three eukaryotic protein-interaction networks

1 reference

12 December 2020

Variation in constraint versus positive selection as an explanation for evolutionary rate variation among anthocyanin genes

1 reference

12 December 2020

Identifiers

DOI

10.1093/GBE/EVQ084

1 reference

2 August 2017

1 reference

2 August 2017

1 reference