(Q34548015)

2 August 2017

AUGUSTUS: ab initio prediction of alternative transcripts (English)

1 reference

2 August 2017

Mario Stanke

1

1 reference

2 August 2017

Oliver Keller

2

1 reference

2 August 2017

Irfan Gunduz

3

1 reference

2 August 2017

Alec Hayes

4

1 reference

2 August 2017

Stephan Waack

5

1 reference

2 August 2017

Burkhard Morgenstern

6

1 reference

2 August 2017

language of work or name

English

0 references

publication date

1 July 2006

1 reference

2 August 2017

Nucleic Acids Research

1 reference

2 August 2017

34

1 reference

2 August 2017

W435-9

1 reference

2 August 2017

Web Server issue

1 reference

Gene prediction in eukaryotes with a generalized hidden Markov model that uses hints from external sources

2 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538822

AUGUSTUS: a web server for gene prediction in eukaryotes that allows user-defined constraints

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538822

AUGUSTUS: a web server for gene finding in eukaryotes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538822

DIALIGN: multiple DNA and protein sequence alignment at BiBiServ

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538822

Computational gene prediction using multiple sources of evidence

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538822

Fast and sensitive multiple alignment of large genomic sequences

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538822

Gene prediction with a hidden Markov model and a new intron submodel

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538822

SLAM: cross-species gene finding and alignment with a generalized pair hidden Markov model

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538822

A genomic view of alternative splicing

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538822

Integrating genomic homology into gene structure prediction.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538822

Human and mouse gene structure: comparative analysis and application to exon prediction

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538822

Prediction of complete gene structures in human genomic DNA

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538822

Basic local alignment search tool

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538822

Prediction of gene structure

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538822

EGASP: collaboration through competition to find human genes.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538822

TigrScan and GlimmerHMM: two open source ab initio eukaryotic gene-finders.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538822

AGenDA: gene prediction by comparative sequence analysis.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538822

The conserved exon method for gene finding

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538822

gff2ps: visualizing genomic annotations

27 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16845043

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

HMM sampling and applications to gene finding and alternative splicing

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16845043

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKL200

1 reference

journals/nar/StankeKGHWM06

2 August 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

2 August 2017

1 reference