(Q34549582)

3 August 2017

Pooled CRISPR screening with single-cell transcriptome readout (English)

1 reference

single cell transcriptomics

3 August 2017

0 references

0 references

1 reference

A curated database reveals trends in single-cell transcriptomics

https://www.nxn.se/single-cell-studies/data.tsv

7 February 2021

10

1 reference

3 August 2017

André F Rendeiro

2

0 references

Thomas Krausgruber

object named as

Thomas Krausgruber

4

0 references

Johanna Klughammer

6

object named as

Johanna Klughammer

1 reference

3 August 2017

1

Paul Datlinger

1 reference

3 August 2017

Donat Alpar

9

0 references

Christian Schmidl

3

object named as

Christian Schmidl

1 reference

3 August 2017

7

Linda C Schuster

1 reference

3 August 2017

Peter Traxler

5

1 reference

3 August 2017

Amelie Kuchler

8

1 reference

3 August 2017

language of work or name

English

0 references

publication date

18 January 2017

1 reference

external data available at URL

3 August 2017

https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE92872

1 reference

A curated database reveals trends in single-cell transcriptomics

https://www.nxn.se/single-cell-studies/data.tsv

7 February 2021

1 reference

3 August 2017

14

1 reference

3 August 2017

297-301

1 reference

3 August 2017

3

1 reference

describes a project that uses

3 August 2017

cell culture

1 reference

A curated database reveals trends in single-cell transcriptomics

7 February 2021

https://www.nxn.se/single-cell-studies/data.tsv

exact match

https://scigraph.springernature.com/pub.10.1038/nmeth.4177

0 references

cites work

Massively parallel digital transcriptional profiling of single cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5334791

Dissecting Immune Circuits by Linking CRISPR-Pooled Screens with Single-Cell RNA-Seq

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5334791

A Multiplexed Single-Cell CRISPR Screening Platform Enables Systematic Dissection of the Unfolded Protein Response

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5334791

Perturb-Seq: Dissecting Molecular Circuits with Scalable Single-Cell RNA Profiling of Pooled Genetic Screens

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5334791

Parallel reverse genetic screening in mutant human cells using transcriptomics

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5334791

Genetic dissection of Flaviviridae host factors through genome-scale CRISPR screens

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5334791

Dissecting direct reprogramming from fibroblast to neuron using single-cell RNA-seq

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5334791

Multi-Omics of Single Cells: Strategies and Applications

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5334791

Enrichr: a comprehensive gene set enrichment analysis web server 2016 update

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5334791

Single-cell transcriptomes reveal characteristic features of human pancreatic islet cell types

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5334791

Gene essentiality and synthetic lethality in haploid human cells

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5334791

Identification and characterization of essential genes in the human genome.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5334791

Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5334791

Improved vectors and genome-wide libraries for CRISPR screening

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5334791

Trimmomatic: a flexible trimmer for Illumina sequence data

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5334791

Genome-scale CRISPR-Cas9 knockout screening in human cells

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5334791

T cell receptor signalling networks: branched, diversified and bounded

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5334791

STAR: ultrafast universal RNA-seq aligner

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5334791

Identifying differentially expressed transcripts from RNA-seq data with biological variation

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5334791

A rapid and general assay for monitoring endogenous gene modification

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5334791

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5334791

The Connectivity Map: a new tool for biomedical research

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5334791

Rapid and reliable DNA assembly via ligase cycling reaction

7 July 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/28099430

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Design and Cloning of an shRNA into a Lentiviral Silencing Vector: Version A

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/28099430

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Pooled CRISPR screening with single-cell transcriptome read-out

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNMETH.4177

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1038/NMETH.4177

1 reference

Dimensions Publication ID

3 August 2017

0 references

1 reference

3 August 2017

1 reference