(Q34558488)

3 August 2017

title

Complete genome sequence of Pedobacter heparinus type strain (HIM 762-3). (English)

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3 August 2017

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whole genome sequencing

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14

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27

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30

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33

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3

Alla Lapidus

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Hans-Peter Klenk

34

Hans-Peter Klenk

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Tijana Glavina Del Rio

4

Tijana Glavina Del Rio

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Philip Hugenholtz

32

Philip Hugenholtz

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Miriam Land

20

Miriam Land

1 reference

3 August 2017

Cliff Han

1

0 references

Sam Pitluck

13

Sam Pitluck

1 reference

3 August 2017

31

Victor Markowitz

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3 August 2017

17

Amrita Pati

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3 August 2017

7

Jan-Fang Cheng

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3 August 2017

26

Thomas Brettin

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3 August 2017

Konstantinos Mavromatis

15

Konstantinos Mavromatis

1 reference

3 August 2017

12

Lynne Goodwin

1 reference

3 August 2017

16

Natalia Mikhailova

1 reference

3 August 2017

21

Loren Hauser

1 reference

3 August 2017

19

Krishna Palaniappan

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3 August 2017

10

Matt Nolan

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3 August 2017

18

Amy Chen

1 reference

3 August 2017

8

Susan Lucas

1 reference

3 August 2017

5

Hope Tice

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3 August 2017

35

John C Detter

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3 August 2017

6

Alex Copeland

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3 August 2017

28

Manfred Rohde

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3 August 2017

25

Olga Chertkov

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3 August 2017

11

David Bruce

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3 August 2017

22

Yun-Juan Chang

1 reference

3 August 2017

29

Jim Bristow

1 reference

3 August 2017

2

Stefan Spring

1 reference

3 August 2017

Feng Chen

9

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3 August 2017

Cynthia C Jeffries

23

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3 August 2017

Elizabeth Saunders

24

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3 August 2017

publication date

20 July 2009

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Standards in genomic sciences

3 August 2017

published in

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3 August 2017

volume

1

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3 August 2017

issue

1

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3 August 2017

page(s)

54-62

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IMG ER: a system for microbial genome annotation expert review and curation

3 August 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035210

A rapid bootstrap algorithm for the RAxML Web servers

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035210

The minimum information about a genome sequence (MIGS) specification

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035210

The Genomes On Line Database (GOLD) in 2007: status of genomic and metagenomic projects and their associated metadata

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035210

Pedobacter panaciterrae sp. nov., isolated from soil in South Korea

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035210

Effect of nutrient periodicity on microbial community dynamics

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035210

Crystal structure of heparinase II from Pedobacter heparinus and its complex with a disaccharide product

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035210

Expression system for high levels of GAG lyase gene expression and study of the hepA upstream region in Flavobacterium heparinum

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035210

Multiple sequence alignment using partial order graphs

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035210

Gene ontology: tool for the unification of biology

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035210

Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035210

Crystal structure of chondroitinase B from Flavobacterium heparinum and its complex with a disaccharide product at 1.7 A resolution

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035210

Classification of heparinolytic bacteria into a new genus, Pedobacter, comprising four species: Pedobacter heparinus comb. nov., Pedobacter piscium comb. nov., Pedobacter africanus sp. nov. and Pedobacter saltans sp. nov. proposal of the family Sphi

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035210

Heparinase production by Flavobacterium heparinum

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035210

In vitro suppression of fungi caused by combinations of apparently non-antagonistic soil bacteria.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035210

The degradation of heparin by bacterial enzymes. I. Adaptation and lyophilized cells

27 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21304637

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Sequential degradation of heparin in Flavobacterium heparinum. Purification and properties of five enzymes involved in heparin degradation

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21304637

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.4056/SIGS.22138

1 reference

Dimensions Publication ID

3 August 2017

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3 August 2017

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