(Q34558939)

3 August 2017

title

Complete genome sequence of Brachyspira murdochii type strain (56-150) (English)

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3 August 2017

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whole genome sequencing

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5

Alla Lapidus

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Hans-Peter Klenk

37

Hans-Peter Klenk

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Roxanne Tapia

16

Roxanne Tapia

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Philip Hugenholtz

35

Philip Hugenholtz

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Sam Pitluck

18

Sam Pitluck

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3 August 2017

34

Victor Markowitz

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1

Amrita Pati

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3 August 2017

Jan-Fang Cheng

12

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Cliff Han

13

Cliff Han

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3 August 2017

Konstantinos Mavromatis

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Konstantinos Mavromatis

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17

Lynne Goodwin

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2

Johannes Sikorski

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3 August 2017

22

Natalia Mikhailova

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24

Krishna Palaniappan

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3 August 2017

26

Loren Hauser

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3 August 2017

8

Matt Nolan

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23

Amy Chen

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3 August 2017

9

Susan Lucas

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28

Cynthia D Jeffries

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3 August 2017

11

Hope Tice

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14

John C Detter

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6

Alex Copeland

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30

Manfred Rohde

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3 August 2017

15

David Bruce

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3 August 2017

27

Yun-Juan Chang

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3 August 2017

3

Sabine Gronow

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3 August 2017

19

Konstantinos Liolios

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3 August 2017

32

James Bristow

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3 August 2017

Christine Munk

4

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3 August 2017

Tijana Glavina Del Tio

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3 August 2017

Feng Chen

10

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3 August 2017

publication date

15 June 2010

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Standards in genomic sciences

3 August 2017

published in

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3 August 2017

volume

2

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3 August 2017

issue

3

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3 August 2017

page(s)

260-269

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Complete genome sequence of Kytococcus sedentarius type strain (541).

3 August 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035287

En route to a genome-based classification of Archaea and Bacteria?

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035287

Prodigal: prokaryotic gene recognition and translation initiation site identification

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035287

A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035287

The Genomes On Line Database (GOLD) in 2009: status of genomic and metagenomic projects and their associated metadata

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035287

IMG ER: a system for microbial genome annotation expert review and curation

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035287

Genome sequence of the pathogenic intestinal spirochete brachyspira hyodysenteriae reveals adaptations to its lifestyle in the porcine large intestine

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035287

A rapid bootstrap algorithm for the RAxML Web servers

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035287

Exilispira thermophila gen. nov., sp. nov., an anaerobic, thermophilic spirochaete isolated from a deep-sea hydrothermal vent chimney.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035287

The minimum information about a genome sequence (MIGS) specification

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035287

Metagenomic analysis of human diarrhea: viral detection and discovery

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035287

Identification of Brachyspira hyodysenteriae and other pathogenic Brachyspira species in chickens from laying flocks with diarrhea or reduced production or both

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035287

EzTaxon: a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035287

Studies in the Nomenclature and Classification of the Bacteria: II. The Primary Subdivisions of the Schizomycetes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035287

Amplification and sequencing of Brachyspira spp. specific portions of nox using paraffin-embedded tissue samples from clinical colitis in Austrian pigs shows frequent solitary presence of Brachyspiramurdochii

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035287

Assessment of diagnostics and antimicrobial susceptibility testing of Brachyspira species using a ring test

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035287

Antimicrobial susceptibility testing of porcine Brachyspira (Serpulina) species isolates

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035287

Differentiation of porcine Brachyspira species by a novel nox PCR-based restriction fragment length polymorphism analysis

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035287

Multiple sequence alignment using partial order graphs

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035287

Phylogenetic foundation of spirochetes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035287

Gene ontology: tool for the unification of biology

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035287

Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035287

Serpulina alvinipulli sp. nov., a new Serpulina species that is enteropathogenic for chickens

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035287

Recognition of two new species of intestinal spirochetes: Serpulina intermedia sp. nov. and Serpulina murdochii sp. nov.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035287

List of Bacterial Names with Standing in Nomenclature: a folder available on the Internet

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035287

The porcine intestinal spirochaetes: identification of new genetic groups

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035287

Genetic characterisation of intestinal spirochaetes and their association with disease.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035287

Intestinal spirochetosis: morphological characterization and cultivation of the spirochete Brachyspira aalborgi gen. nov., sp. nov

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035287

Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035287

GenePRIMP: a gene prediction improvement pipeline for prokaryotic genomes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035287

How many bootstrap replicates are necessary?

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035287

Development of a multilocus sequence typing scheme for intestinal spirochaetes within the genus Brachyspira

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035287

Reclassification of Serpulina intermedia and Serpulina murdochii in the genus Brachyspira as Brachyspira intermedia comb. nov. and Brachyspira murdochii comb. nov.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035287

Reclassification of Leptospira parva Hovind-Hougen et al. 1982 as Turneriella parva gen. nov., comb. nov.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035287

Isolation of Serpulina murdochii from the joint fluid of a lame pig

27 October 2018

1 reference

12 December 2020

The use of multilocus enzyme electrophoresis to characterise intestinal spirochaetes (Brachyspira spp.) colonising hens in commercial flocks

1 reference

12 December 2020

Prevalence and disease association of intestinal spirochaetes in chickens in eastern Australia

1 reference

12 December 2020

1 reference

12 December 2020

Identifiers

DOI

10.4056/SIGS.831993

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Dimensions Publication ID

3 August 2017

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3 August 2017

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