(Q34559234)

3 August 2017

Complete genome sequence of Spirochaeta smaragdinae type strain (SEBR 4228). (English)

1 reference

3 August 2017

0 references

whole genome sequencing

1 reference

1 reference

12

1 reference

3 August 2017

20

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3 August 2017

27

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3 August 2017

28

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3 August 2017

32

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3 August 2017

36

1 reference

3 August 2017

4

Alla Lapidus

0 references

Hans-Peter Klenk

35

Hans-Peter Klenk

0 references

Tijana Glavina Del Rio

7

Tijana Glavina Del Rio

0 references

Roxanne Tapia

13

Roxanne Tapia

0 references

Philip Hugenholtz

34

Philip Hugenholtz

0 references

Tanja Woyke

30

Tanja Woyke

0 references

Evelyne Brambilla

26

Evelyne Brambilla

0 references

Cliff Han

Cliff Han

14

0 references

Sam Pitluck

10

Sam Pitluck

1 reference

3 August 2017

33

Victor Markowitz

1 reference

3 August 2017

17

Amrita Pati

1 reference

3 August 2017

Jan-Fang Cheng

9

0 references

Konstantinos Mavromatis

1

Konstantinos Mavromatis

1 reference

3 August 2017

16

Lynne Goodwin

1 reference

3 August 2017

29

Johannes Sikorski

1 reference

3 August 2017

19

Krishna Palaniappan

1 reference

3 August 2017

21

Loren Hauser

1 reference

3 August 2017

6

Matt Nolan

1 reference

3 August 2017

5

Susan Lucas

1 reference

3 August 2017

23

Cynthia D Jeffries

1 reference

3 August 2017

24

John C Detter

1 reference

3 August 2017

8

Hope Tice

1 reference

3 August 2017

3

Olga Chertkov

1 reference

3 August 2017

25

Manfred Rohde

1 reference

3 August 2017

15

David Bruce

1 reference

3 August 2017

22

Yun-Juan Chang

1 reference

3 August 2017

2

Montri Yasawong

1 reference

3 August 2017

11

Konstantinos Liolios

1 reference

3 August 2017

31

James Bristow

1 reference

3 August 2017

Ami Chen

18

1 reference

3 August 2017

18 October 2010

1 reference

Standards in genomic sciences

3 August 2017

1 reference

3 August 2017

3

1 reference

3 August 2017

2

1 reference

3 August 2017

136-144

1 reference

https://scigraph.springernature.com/pub.10.4056/sigs.1143106

3 August 2017

0 references

cites work

Complete genome sequence of Kytococcus sedentarius type strain (541).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035371

En route to a genome-based classification of Archaea and Bacteria?

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035371

Prodigal: prokaryotic gene recognition and translation initiation site identification

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035371

A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035371

The Genomes On Line Database (GOLD) in 2009: status of genomic and metagenomic projects and their associated metadata

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035371

Spirochaeta dissipatitropha sp. nov., an alkaliphilic, obligately anaerobic bacterium, and emended description of the genus Spirochaeta Ehrenberg 1835.

7 July 2018

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035371

7 July 2018

https://api.crossref.org/works/10.4056%2FSIGS.1143106

IMG ER: a system for microbial genome annotation expert review and curation

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035371

Bacterial flagellar diversity and evolution: seek simplicity and distrust it?

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035371

A rapid bootstrap algorithm for the RAxML Web servers

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035371

The All-Species Living Tree project: a 16S rRNA-based phylogenetic tree of all sequenced type strains

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035371

The minimum information about a genome sequence (MIGS) specification

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035371

Velvet: algorithms for de novo short read assembly using de Bruijn graphs

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035371

EzTaxon: a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035371

Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035371

Studies in the Nomenclature and Classification of the Bacteria: II. The Primary Subdivisions of the Schizomycetes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035371

Improved Assay for Rhodanese in Thiobacillus spp.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035371

rdlA, a new gene encoding a rhodanese-like protein in Halanaerobium congolense and other thiosulfate-reducing anaerobes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035371

Spirochaeta americana sp. nov., a new haloalkaliphilic, obligately anaerobic spirochaete isolated from soda Mono Lake in California

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035371

Multiple sequence alignment using partial order graphs

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035371

The neomuran origin of archaebacteria, the negibacterial root of the universal tree and bacterial megaclassification

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035371

Spirochaeta bajacaliforniensis sp. n. from a microbial mat community at Laguna Figueroa, Baja California Norte, Mexico

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035371

Gene ontology: tool for the unification of biology

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035371

Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035371

Spirochaeta smaragdinae sp. nov., a new mesophilic strictly anaerobic spirochete from an oil field

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035371

Dethiosulfovibrio peptidovorans gen. nov., sp. nov., a new anaerobic, slightly halophilic, thiosulfate-reducing bacterium from corroding offshore oil wells

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035371

List of Bacterial Names with Standing in Nomenclature: a folder available on the Internet

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035371

Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035371

GenePRIMP: a gene prediction improvement pipeline for prokaryotic genomes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035371

How many bootstrap replicates are necessary?

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035371

Validation of publication of new names and new combinations previously effectively published outside the IJSB

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035371

27 October 2018

Identifiers

DOI

10.4056/SIGS.1143106

1 reference

PubMed ID

21304743

Dimensions Publication ID

3 August 2017

0 references

1 reference

3 August 2017

1 reference

PubMed ID

21304743