(Q34575655)

3 August 2017

title

Repeat expansion affects both transcription initiation and elongation in friedreich ataxia cells (English)

1 reference

3 August 2017

1 reference

Daman Kumari

1

1 reference

3 August 2017

Rea Erika Biacsi

series ordinal

2

1 reference

3 August 2017

Karen Usdin

series ordinal

3

1 reference

3 August 2017

language of work or name

English

0 references

publication date

2 December 2010

1 reference

Journal of Biological Chemistry

3 August 2017

published in

1 reference

3 August 2017

volume

286

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3 August 2017

issue

6

1 reference

3 August 2017

page(s)

4209-4215

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Long intronic GAA repeats causing Friedreich ataxia impede transcription elongation

3 August 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039332

Two new pimelic diphenylamide HDAC inhibitors induce sustained frataxin upregulation in cells from Friedreich's ataxia patients and in a mouse model

7 July 2018

1 reference

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Epigenetic silencing in Friedreich ataxia is associated with depletion of CTCF (CCCTC-binding factor) and antisense transcription

7 July 2018

1 reference

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Modifications of RNA polymerase II are pivotal in regulating gene expression states

7 July 2018

1 reference

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Chemical probes identify a role for histone deacetylase 3 in Friedreich's ataxia gene silencing

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039332

Global analysis of H3K4 methylation defines MLL family member targets and points to a role for MLL1-mediated H3K4 methylation in the regulation of transcriptional initiation by RNA polymerase II.

7 July 2018

1 reference

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Molecular regulation of H3K4 trimethylation by Wdr82, a component of human Set1/COMPASS

7 July 2018

1 reference

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Long intronic GAA*TTC repeats induce epigenetic changes and reporter gene silencing in a molecular model of Friedreich ataxia

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039332

HDAC inhibitors correct frataxin deficiency in a Friedreich ataxia mouse model

7 July 2018

1 reference

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Iron-dependent regulation of frataxin expression: implications for treatment of Friedreich ataxia

7 July 2018

1 reference

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SIRT1 inhibition alleviates gene silencing in Fragile X mental retardation syndrome

7 July 2018

1 reference

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The Friedreich ataxia GAA repeat expansion mutation induces comparable epigenetic changes in human and transgenic mouse brain and heart tissues

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039332

Wdr82 is a C-terminal domain-binding protein that recruits the Setd1A Histone H3-Lys4 methyltransferase complex to transcription start sites of transcribed human genes

7 July 2018

1 reference

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High-resolution profiling of histone methylations in the human genome

7 July 2018

1 reference

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Transcription-coupled deposition of histone modifications during MHC class II gene activation

7 July 2018

1 reference

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Repeat-induced epigenetic changes in intron 1 of the frataxin gene and its consequences in Friedreich ataxia

7 July 2018

1 reference

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Identification and characterization of the human Set1B histone H3-Lys4 methyltransferase complex

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039332

Effects of Friedreich's ataxia (GAA)n*(TTC)n repeats on RNA synthesis and stability

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039332

Histone deacetylase inhibitors reverse gene silencing in Friedreich's ataxia.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039332

Histone H4-K16 acetylation controls chromatin structure and protein interactions

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039332

Histone H3 lysine 4 methylation patterns in higher eukaryotic genes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039332

Methylation of histone H3 by Set2 in Saccharomyces cerevisiae is linked to transcriptional elongation by RNA polymerase II

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039332

The molecular basis of Friedreich ataxia.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039332

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039332

Active genes are tri-methylated at K4 of histone H3

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039332

CTCF-binding sites flank CTG/CAG repeats and form a methylation-sensitive insulator at the DM1 locus

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039332

Different phosphorylated forms of RNA polymerase II and associated mRNA processing factors during transcription

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039332

The GAA*TTC triplet repeat expanded in Friedreich's ataxia impedes transcription elongation by T7 RNA polymerase in a length and supercoil dependent manner

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039332

The GAA triplet-repeat expansion in Friedreich ataxia interferes with transcription and may be associated with an unusual DNA structure

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039332

Friedreich's ataxia: autosomal recessive disease caused by an intronic GAA triplet repeat expansion

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039332

Identification of autoantibodies to RNA polymerase II. Occurrence in systemic sclerosis and association with autoantibodies to RNA polymerases I and III

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039332

Promotion of specific in vitro transcription by excised "TATA" box sequences inserted in a foreign nucleotide environment

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039332

DNA sequences required for transcription in vivo of the human corticotropin-beta-lipotropin precursor gene

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039332

The "initiator" as a transcription control element

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039332

Intragenic DNA methylation alters chromatin structure and elongation efficiency in mammalian cells

7 July 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.194035

Sticky DNA: self-association properties of long GAA.TTC repeats in R.R.Y triplex structures from Friedreich's ataxia.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.194035

Ancient repeated DNA elements and the regulation of the human frataxin promoter

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.194035

Ring1-mediated ubiquitination of H2A restrains poised RNA polymerase II at bivalent genes in mouse ES cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.194035

Phenotypic variability in Friedreich ataxia: role of the associated GAA triplet repeat expansion

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21127046

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1074/JBC.M110.194035

1 reference

3 August 2017

1 reference

3 August 2017

1 reference