(Q34627500)

English

Detailed analysis of base preferences at the cleavage site of a trans-acting HDV ribozyme: a mutation that changes cleavage site specificity

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scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

Detailed analysis of base preferences at the cleavage site of a trans-acting HDV ribozyme: a mutation that changes cleavage site specificity (English)

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

0 references

author name string

Nishikawa F

1

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

Fauzi H

2

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

Nishikawa S

3

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

language of work or name

0 references

publication date

1 April 1997

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

Nucleic Acids Research

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

25

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

8

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

1605-1610

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

Selection in vitro of trans-acting genomic human hepatitis delta virus (HDV) ribozymes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146615

7 July 2018

A pseudoknot ribozyme structure is active in vivo and required for hepatitis delta virus RNA replication

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146615

7 July 2018

Folding of the HDV antigenomic ribozyme pseudoknot structure deduced from long-range photocrosslinks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146615

7 July 2018

Core sequences and a cleavage site wobble pair required for HDV antigenomic ribozyme self-cleavage

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146615

7 July 2018

Effects of circular permutation on the cis-cleavage reaction of a hepatitis delta virus ribozyme: application to trans-acting ribozyme design

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146615

7 July 2018

Mutagenesis analysis of a hepatitis delta virus genomic ribozyme

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146615

7 July 2018

Identification of important bases in a single-stranded region (SSrC) of the hepatitis delta (delta) virus ribozyme

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146615

7 July 2018

Cis- and trans-acting ribozymes from a human pathogen, hepatitis delta virus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146615

7 July 2018

Identification of phosphate oxygens that are important for self-cleavage activity of the HDV ribozyme by phosphorothioate substitution interference analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146615

7 July 2018

A circular trans-acting hepatitis delta virus ribozyme

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146615

7 July 2018

Regulation of the hepatitis delta virus ribozymes: to cleave or not to cleave?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146615

7 July 2018

3-D models of the antigenomic ribozyme of the hepatitis delta agent with eight new contacts suggested by sequence analysis of 188 cDNA clones

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146615

7 July 2018

Molecular cloning and sequencing of a human hepatitis delta (delta) virus RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146615

7 July 2018

Characterization of self-cleaving RNA sequences on the genome and antigenome of human hepatitis delta virus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146615

7 July 2018

Human hepatitis delta virus RNA subfragments contain an autocleavage activity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146615

7 July 2018

Antigenomic RNA of human hepatitis delta virus can undergo self-cleavage.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146615

7 July 2018

Improved free-energy parameters for predictions of RNA duplex stability

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146615

7 July 2018

A pseudoknot-like structure required for efficient self-cleavage of hepatitis delta virus RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146615

7 July 2018

Efficient trans cleavage and a common structural motif for the ribozymes of the human hepatitis delta agent

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146615

7 July 2018

Evidence that genomic and antigenomic RNA self-cleaving elements from hepatitis delta virus have similar secondary structures

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146615

7 July 2018

Deletion of internal sequence on the HDV-ribozyme: elucidation of functionally important single-stranded loop regions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146615

7 July 2018

Random mutations to evaluate the role of bases at two important single-stranded regions of genomic HDV ribozyme

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146615

7 July 2018

Mutagenesis analysis of the self-cleavage domain of hepatitis delta virus antigenomic RNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146615

7 July 2018

Secondary structure of the self-cleaving RNA of hepatitis delta virus: applications to catalytic RNA design

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146615

7 July 2018

Inhibition of the self-cleavage reaction of the human hepatitis delta virus ribozyme by antibiotics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146615

26 October 2018

Point and compensation mutations to evaluate essential stem structures of genomic HDV ribozyme.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146615

26 October 2018

Chemical probing studies of variants of the genomic hepatitis delta virus ribozyme by primer extension analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146615

26 October 2018

A three-dimensional model of hepatitis delta virus ribozyme based on biochemical and mutational analyses

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146615

26 October 2018

Constructing an efficient trans-acting genomic HDV ribozyme

1 reference

https://pubmed.ncbi.nlm.nih.gov/9092669

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A sequence element necessary for self-cleavage of the antigenomic hepatitis delta RNA in 20 M formamide

1 reference

https://pubmed.ncbi.nlm.nih.gov/9092669

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Systematic substitution of individual bases in two important single-stranded regions of the HDV ribozyme for evaluation of the role of specific bases

1 reference

https://pubmed.ncbi.nlm.nih.gov/9092669

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/NAR/25.8.1605

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

ResearchGate publication ID

0 references

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