(Q34629093)

3 August 2017

title

Functional knowledge transfer for high-accuracy prediction of under-studied biological processes (English)

1 reference

3 August 2017

2

0 references

Rebecca D. Burdine

7

0 references

Casey S. Greene

3

0 references

Olga Troyanskaya

8

object named as

Olga G Troyanskaya

1 reference

3 August 2017

Christopher Y Park

1

1 reference

3 August 2017

Jessica Rowland

4

1 reference

3 August 2017

Yuanfang Guan

5

1 reference

3 August 2017

Lars A Bongo

6

1 reference

3 August 2017

publication date

14 March 2013

1 reference

PLOS Computational Biology

3 August 2017

published in

1 reference

3 August 2017

volume

9

1 reference

3 August 2017

issue

3

1 reference

3 August 2017

page(s)

e1002957

1 reference

Creative Commons Attribution 4.0 International

3 August 2017

copyright license

start time

14 March 2013

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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Sox17 and chordin are required for formation of Kupffer's vesicle and left-right asymmetry determination in zebrafish

7 July 2018

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7 July 2018

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7 July 2018

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The Zn finger protein Iguana impacts Hedgehog signaling by promoting ciliogenesis

7 July 2018

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7 July 2018

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7 July 2018

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Initiation and propagation of posterior to anterior (PA) waves in zebrafish left-right development

7 July 2018

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Nodal signaling promotes the speed and directional movement of cardiomyocytes in zebrafish

7 July 2018

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7 July 2018

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Direct and indirect roles for Nodal signaling in two axis conversions during asymmetric morphogenesis of the zebrafish heart

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3597527

Inferring mouse gene functions from genomic-scale data using a combined functional network/classification strategy

7 July 2018

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7 July 2018

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Predicting gene function in a hierarchical context with an ensemble of classifiers

7 July 2018

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A critical assessment of Mus musculus gene function prediction using integrated genomic evidence

7 July 2018

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7 July 2018

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A global genomic view of MIF knockdown-mediated cell cycle arrest

7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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Gene function prediction from congruent synthetic lethal interactions in yeast

7 July 2018

1 reference

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Phenotypic responses to mechanical stress in fibroblasts from tendon, cornea and skin

7 July 2018

1 reference

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Discovery of biological networks from diverse functional genomic data

7 July 2018

1 reference

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Hierarchical multi-label prediction of gene function

7 July 2018

1 reference

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Gene selection and classification of microarray data using random forest.

7 July 2018

1 reference

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7 July 2018

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7 July 2018

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Left-right asymmetry and congenital cardiac defects: getting to the heart of the matter in vertebrate left-right axis determination

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3597527

Glyoxalase 1 and glutathione reductase 1 regulate anxiety in mice.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3597527

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7 July 2018

1 reference

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Smaller inner ear sensory epithelia in Neurog 1 null mice are related to earlier hair cell cycle exit

7 July 2018

1 reference

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Mechanisms of aging in senescence-accelerated mice

7 July 2018

1 reference

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7 July 2018

1 reference

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Neuronal subtype-specific genes that control corticospinal motor neuron development in vivo

7 July 2018

1 reference

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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Germ-line transmission of a myocardium-specific GFP transgene reveals critical regulatory elements in the cardiac myosin light chain 2 promoter of zebrafish

7 July 2018

1 reference

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A Bayesian framework for combining heterogeneous data sources for gene function prediction (in Saccharomyces cerevisiae).

7 July 2018

1 reference

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The Zebrafish Information Network (ZFIN): the zebrafish model organism database

7 July 2018

1 reference

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A role for cell polarity proteins in mitotic exit

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3597527

Large-scale prediction of Saccharomyces cerevisiae gene function using overlapping transcriptional clusters

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3597527

Prediction of Human Protein Function from Post-translational Modifications and Localization Features

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3597527

Morpholino antisense oligonucleotides: tools for investigating vertebrate development

7 July 2018

1 reference

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WormBase: network access to the genome and biology of Caenorhabditis elegans

7 July 2018

1 reference

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Genomic expression programs in the response of yeast cells to environmental changes

7 July 2018

1 reference

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Functional discovery via a compendium of expression profiles

7 July 2018

1 reference

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Gene ontology: tool for the unification of biology

7 July 2018

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Prediction of gene function by genome-scale expression analysis: prostate cancer-associated genes

7 July 2018

1 reference

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MIPS: a database for genomes and protein sequences

7 July 2018

1 reference

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A combined algorithm for genome-wide prediction of protein function

7 July 2018

1 reference

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casanova plays an early and essential role in endoderm formation in zebrafish

7 July 2018

1 reference

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Angiopoietins 3 and 4: diverging gene counterparts in mice and humans

7 July 2018

1 reference

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Cluster analysis and display of genome-wide expression patterns

7 July 2018

1 reference

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Zebrafish nodal-related genes are implicated in axial patterning and establishing left-right asymmetry

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3597527

Phylogenomics: improving functional predictions for uncharacterized genes by evolutionary analysis

7 July 2018

1 reference

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SGD: Saccharomyces Genome Database

7 July 2018

1 reference

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Changing patterns of gene expression define four stages of cerebellar granule neuron differentiation

7 July 2018

1 reference

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Checkpoints: controls that ensure the order of cell cycle events

7 July 2018

1 reference

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Global protein function prediction from protein-protein interaction networks

7 July 2018

1 reference

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mei-41 and bub1 block mitosis at two distinct steps in response to incomplete DNA replication in Drosophila embryos

21 January 2018

1 reference

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Mutations in N-cadherin and a Stardust homolog, Nagie oko, affect cell-cycle exit in zebrafish retina

21 January 2018

1 reference

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Patterns of gene expression during Drosophila mesoderm development

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1002957

Rotation and asymmetric development of the zebrafish heart requires directed migration of cardiac progenitor cells

21 January 2018

1 reference

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Asymmetric involution of the myocardial field drives heart tube formation in zebrafish.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1002957

Lefty antagonism of Squint is essential for normal gastrulation

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1002957

BioMart: driving a paradigm change in biological data management

21 January 2018

1 reference

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Asymmetric nodal signaling in the zebrafish diencephalon positions the pineal organ.

21 January 2018

1 reference

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Probabilistic model of the human protein-protein interaction network

26 October 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1002957

The KEGG databases and tools facilitating omics analysis: latest developments involving human diseases and pharmaceuticals

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23516347

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

A probabilistic functional network of yeast genes

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23516347

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Random Forests

1 reference

Astrophysics Data System

15 December 2022

https://ui.adsabs.harvard.edu/abs/2001MachL..45....5B/citations

Identifiers

DOI

10.1371/JOURNAL.PCBI.1002957

1 reference

journals/ploscb/ParkWGRGBBT13

3 August 2017

0 references

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

3 August 2017

1 reference