(Q34643385)

3 August 2017

title

Strong positive selection and recombination drive the antigenic variation of the PilE protein of the human pathogen Neisseria meningitidis (English)

1 reference

3 August 2017

main subject

Neisseria meningitidis

1 reference

2

Takashi Gojobori

1 reference

3 August 2017

T Daniel Andrews

1

1 reference

3 August 2017

language of work or name

English

0 references

publication date

1 January 2004

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3 August 2017

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3 August 2017

volume

166

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3 August 2017

issue

1

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3 August 2017

page(s)

25-32

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Effect of recombination on the accuracy of the likelihood method for detecting positive selection at amino acid sites.

3 August 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1470718

Codon-substitution models for heterogeneous selection pressure at amino acid sites

7 July 2018

1 reference

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Complete DNA sequence of a serogroup A strain of Neisseria meningitidis Z2491

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1470718

Complete Genome Sequence of Neisseria meningitidis Serogroup B Strain MC58

7 July 2018

1 reference

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A novel mechanism for control of antigenic variation in the haemagglutinin gene family of mycoplasma synoviae

7 July 2018

1 reference

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A comparative analysis of pilin genes from pathogenic and nonpathogenic Neisseria species

7 July 2018

1 reference

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Interaction mechanisms of encapsulated meningococci with eucaryotic cells: what does this tell us about the crossing of the blood-brain barrier by Neisseria meningitidis?

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1470718

Genetic variation of the Borrelia burgdorferi gene vlsE involves cassette-specific, segmental gene conversion

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1470718

Likelihood models for detecting positively selected amino acid sites and applications to the HIV-1 envelope gene

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1470718

Questions about gonococcal pilus phase- and antigenic variation

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1470718

Assembly and antigenicity of the Neisseria gonorrhoeae pilus mapped with antibodies

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1470718

fastDNAmL: a tool for construction of phylogenetic trees of DNA sequences using maximum likelihood.

7 July 2018

1 reference

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Adaptive evolution of highly mutable loci in pathogenic bacteria

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1470718

Structure of the fibre-forming protein pilin at 2.6 A resolution

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1470718

Evolutionary trees from DNA sequences: A maximum likelihood approach

7 July 2018

1 reference

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Genetic Transformation of Neisseria gonorrhoeae to Streptomycin Resistance

7 July 2018

1 reference

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Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1470718

Identification and arrangement of the DNA sequence recognized in specific transformation of Neisseria gonorrhoeae

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1470718

DNA transformation leads to pilin antigenic variation in Neisseria gonorrhoeae

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1470718

Neisseria meningitidis C114 contains silent, truncated pilin genes that are homologous to Neisseria gonorrhoeae pil sequences

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1470718

Antigenic variation of gonococcal pilus involves assembly of separated silent gene segments

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1470718

The repertoire of silent pilus genes in Neisseria gonorrhoeae: evidence for gene conversion.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1470718

Analyzing the mosaic structure of genes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1470718

Silent pilin genes of Neisseria gonorrhoeae MS11 and the occurrence of related hypervariant sequences among other gonococcal isolates

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1470718

Host-symbiont conflicts: positive selection on an outer membrane protein of parasitic but not mutualistic Rickettsiaceae

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1470718

Antigenic variation of Anaplasma marginale msp2 occurs by combinatorial gene conversion

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1470718

Antigenic variation of gonococcal pilin expression in vivo: analysis of the strain FA1090 pilin repertoire and identification of the pilS gene copies recombining with pilE during experimental human infection

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1470718

A likelihood method for the detection of selection and recombination using nucleotide sequences

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1470718

Transfer of antibiotic resistance in mixed cultures of Neisseria gonorrhoeae

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1470718

Phylogenetic Evidence for Frequent Positive Selection and Recombination in the Meningococcal Surface Antigen PorB

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1470718

Reassortment of pilin genes in Neisseria gonorrhoeae occurs by two distinct mechanisms

9 December 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1470718

A method for detecting positive selection at single amino acid sites

9 December 2018

1 reference

12 December 2020

Molecular models accounting for the gene conversion reactions mediating gonococcal pilin antigenic variation

1 reference

12 December 2020

ADAPTSITE: detecting natural selection at single amino acid sites

1 reference

12 December 2020

PilC of pathogenic Neisseria is associated with the bacterial cell surface

1 reference

12 December 2020

Neisseria PilC protein identified as type-4 pilus tip-located adhesin

1 reference

12 December 2020

10.1534/GENETICS.166.1.25

Identifiers

DOI

1 reference

3 August 2017

1 reference

3 August 2017

1 reference