(Q34689511)

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Conformational B-cell epitope prediction on antigen protein structures: a review of current algorithms and comparison with common binding site prediction methods

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scholarly article

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Europe PubMed Central

PubMed publication ID

4 August 2017

Conformational B-cell epitope prediction on antigen protein structures: a review of current algorithms and comparison with common binding site prediction methods (English)

1 reference

Europe PubMed Central

PubMed publication ID

4 August 2017

protein structure prediction

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author name string

Bo Yao

1

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Europe PubMed Central

PubMed publication ID

4 August 2017

Dandan Zheng

2

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Europe PubMed Central

PubMed publication ID

4 August 2017

Shide Liang

3

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Europe PubMed Central

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4 August 2017

Chi Zhang

4

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4 August 2017

language of work or name

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publication date

19 April 2013

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Europe PubMed Central

PubMed publication ID

4 August 2017

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Europe PubMed Central

PubMed publication ID

4 August 2017

8

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Europe PubMed Central

PubMed publication ID

4 August 2017

4

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Europe PubMed Central

PubMed publication ID

4 August 2017

e62249

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Europe PubMed Central

PubMed publication ID

4 August 2017

copyright license

Creative Commons Attribution 4.0 International

19 April 2013

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April 2022 Public Data File from Crossref

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Prediction of conformational B-cell epitopes from 3D structures by random forests with a distance-based feature

1 reference

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Recent advances in B-cell epitope prediction methods

1 reference

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7 July 2018

EPSVR and EPMeta: prediction of antigenic epitopes using support vector regression and multiple server results

1 reference

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ConSurf 2010: calculating evolutionary conservation in sequence and structure of proteins and nucleic acids

1 reference

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Prediction of antigenic epitopes on protein surfaces by consensus scoring

1 reference

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Epitopia: a web-server for predicting B-cell epitopes.

1 reference

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SEPPA: a computational server for spatial epitope prediction of protein antigens

1 reference

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An introduction to epitope prediction methods and software

1 reference

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COBEpro: a novel system for predicting continuous B-cell epitopes

1 reference

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ElliPro: a new structure-based tool for the prediction of antibody epitopes

1 reference

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Predicting linear B-cell epitopes using string kernels

1 reference

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PEPITO: improved discontinuous B-cell epitope prediction using multiple distance thresholds and half sphere exposure

1 reference

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Antibody-protein interactions: benchmark datasets and prediction tools evaluation

1 reference

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PIER: protein interface recognition for structural proteomics.

1 reference

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Towards a consensus on datasets and evaluation metrics for developing B-cell epitope prediction tools

1 reference

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7 July 2018

Prediction of residues in discontinuous B-cell epitopes using protein 3D structures

1 reference

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7 July 2018

Protein binding site prediction using an empirical scoring function

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3631208

7 July 2018

Improved method for predicting linear B-cell epitopes

1 reference

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CEP: a conformational epitope prediction server.

1 reference

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Induction of hepatitis A virus-neutralizing antibody by a virus-specific synthetic peptide

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New hydrophilicity scale derived from high-performance liquid chromatography peptide retention data: correlation of predicted surface residues with antigenicity and X-ray-derived accessible sites

1 reference

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A semi-empirical method for prediction of antigenic determinants on protein antigens

1 reference

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Prediction of continuous B-cell epitopes in an antigen using recurrent neural network.

1 reference

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21 January 2018

Prediction of linear B-cell epitopes using amino acid pair antigenicity scale.

1 reference

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21 January 2018

Benchmarking B cell epitope prediction: underperformance of existing methods

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0062249

21 January 2018

Mapping Epitope Structure and Activity: From One-Dimensional Prediction to Four-Dimensional Description of Antigenic Specificity

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0062249

21 January 2018

A machine-learning approach for predicting B-cell epitopes.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0062249

21 January 2018

ProMate: a structure based prediction program to identify the location of protein-protein binding sites

1 reference

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21 January 2018

Identifiers

10.1371/JOURNAL.PONE.0062249

1 reference

Europe PubMed Central

PubMed publication ID

4 August 2017

2013PLoSO...862249Y

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PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

4 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

4 August 2017

ResearchGate publication ID

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