(Q34720884)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21368203%20AND%20SRC:MED&resulttype=core&format=json

24 January 2020

title

Dynamical fingerprints for probing individual relaxation processes in biomolecular dynamics with simulations and kinetic experiments (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21368203%20AND%20SRC:MED&resulttype=core&format=json

24 January 2020

2

1 reference

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24 January 2020

Isabella Daidone

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21368203%20AND%20SRC:MED&resulttype=core&format=json

24 January 2020

Markus Sauer

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21368203%20AND%20SRC:MED&resulttype=core&format=json

24 January 2020

Jeremy C Smith

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21368203%20AND%20SRC:MED&resulttype=core&format=json

24 January 2020

author name string

Frank Noé

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21368203%20AND%20SRC:MED&resulttype=core&format=json

24 January 2020

Marc Löllmann

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21368203%20AND%20SRC:MED&resulttype=core&format=json

24 January 2020

John D Chodera

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21368203%20AND%20SRC:MED&resulttype=core&format=json

24 January 2020

language of work or name

English

0 references

publication date

2 March 2011

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21368203%20AND%20SRC:MED&resulttype=core&format=json

Proceedings of the National Academy of Sciences of the United States of America

24 January 2020

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21368203%20AND%20SRC:MED&resulttype=core&format=json

24 January 2020

volume

108

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21368203%20AND%20SRC:MED&resulttype=core&format=json

24 January 2020

issue

12

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21368203%20AND%20SRC:MED&resulttype=core&format=json

24 January 2020

page(s)

4822-4827

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21368203%20AND%20SRC:MED&resulttype=core&format=json

Hydrogen-bond driven loop-closure kinetics in unfolded polypeptide chains

24 January 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3064371

Molecular simulation of ab initio protein folding for a millisecond folder NTL9(1-39)

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3064371

Constructing the equilibrium ensemble of folding pathways from short off-equilibrium simulations.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3064371

Progress and challenges in the automated construction of Markov state models for full protein systems

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3064371

Reaching the protein folding speed limit with large, sub-microsecond pressure jumps

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3064371

Fluorescence quenching by photoinduced electron transfer: a reporter for conformational dynamics of macromolecules.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3064371

A unified model of protein dynamics.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3064371

Transition networks for modeling the kinetics of conformational change in macromolecules

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3064371

Dynamics of unfolded polypeptide chains in crowded environment studied by fluorescence correlation spectroscopy.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3064371

Structure-function-folding relationship in a WW domain

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3064371

Single-molecule fluorescence studies of protein folding and conformational dynamics

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3064371

On the relationship among three theories of relaxation in disordered systems

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3064371

Observation of a Power-Law Memory Kernel for Fluctuations within a Single Protein Molecule

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3064371

Theory of protein folding

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3064371

How fast is protein hydrophobic collapse?

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3064371

Mg2+-dependent conformational change of RNA studied by fluorescence correlation and FRET on immobilized single molecules.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3064371

Analysis of kinetics using a hybrid maximum-entropy/nonlinear-least-squares method: application to protein folding

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3064371

Measuring the rate of intramolecular contact formation in polypeptides

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3064371

Ligand binding and conformational motions in myoglobin

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3064371

One- and two-photon excited fluorescence lifetimes and anisotropy decays of green fluorescent proteins.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3064371

Submillisecond protein folding kinetics studied by ultrarapid mixing

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3064371

Dynamical transition of myoglobin revealed by inelastic neutron scattering

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3064371

The Energy Landscapes and Motions of Proteins

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3064371

A fluorescence-based method for direct measurement of submicrosecond intramolecular contact formation in biopolymers: an exploratory study with polypeptides

7 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1004646108

Automatic discovery of metastable states for the construction of Markov models of macromolecular conformational dynamics

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1004646108

Coarse master equations for peptide folding dynamics.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1004646108

Hierarchical analysis of conformational dynamics in biomolecules: transition networks of metastable states.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1004646108

Dynamics of unfolded polypeptide chains as model for the earliest steps in protein folding.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1004646108

Exploring zipping and assembly as a protein folding principle

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1004646108

Fluorescence correlation spectroscopy. I. Conceptual basis and theory

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1004646108

CONTIN: A general purpose constrained regularization program for inverting noisy linear algebraic and integral equations

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1004646108

Kinetic analysis of molecular dynamics simulations reveals changes in the denatured state and switch of folding pathways upon single-point mutation of a beta-sheet miniprotein

21 January 2018

1 reference

12 December 2020

Single molecule kinetics. I. Theoretical analysis of indicators

1 reference

12 December 2020

Unfolded Protein and Peptide Dynamics Investigated with Single-Molecule FRET and Correlation Spectroscopy from Picoseconds to Seconds†

1 reference

12 December 2020

The folding mechanism of a beta-sheet: the WW domain

1 reference

12 December 2020

Identifiers

DOI

10.1073/PNAS.1004646108

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21368203%20AND%20SRC:MED&resulttype=core&format=json

24 January 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21368203%20AND%20SRC:MED&resulttype=core&format=json

24 January 2020

PubMed publication ID

21368203

1 reference