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Chromodomains direct integration of retrotransposons to heterochromatin.
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Europe PubMed Central
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2259100
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2 January 2020
title
Chromodomains direct integration of retrotransposons to heterochromatin
(English)
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Europe PubMed Central
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2259100
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18256242%20AND%20SRC:MED&resulttype=core&format=json
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2 January 2020
main subject
retrotransposon
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author
Daniel F Voytas
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5
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Europe PubMed Central
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2259100
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18256242%20AND%20SRC:MED&resulttype=core&format=json
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2 January 2020
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Xiang Gao
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1
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Europe PubMed Central
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2259100
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2 January 2020
Yi Hou
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2
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2259100
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2 January 2020
Hirotaka Ebina
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3
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2 January 2020
Henry L Levin
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4
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2 January 2020
publication date
6 February 2008
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2259100
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2 January 2020
published in
Genome Research
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2 January 2020
volume
18
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2 January 2020
issue
3
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2259100
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2 January 2020
page(s)
359-369
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2 January 2020
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Modular evolution of the integrase domain in the Ty3/Gypsy class of LTR retrotransposons
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7 July 2018
Schizosaccharomyces pombe retrotransposon Tf2 mobilizes primarily through homologous cDNA recombination
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Rice (Oryza sativa) centromeric regions consist of complex DNA.
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7 July 2018
A single amino acid change in the yeast retrotransposon Ty5 abolishes targeting to silent chromatin
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7 July 2018
The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools
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7 July 2018
The pheromone response pathway activates transcription of Ty5 retrotransposons located within silent chromatin of Saccharomyces cerevisiae
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259100
retrieved
7 July 2018
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259100
retrieved
7 July 2018
A conserved repetitive DNA element located in the centromeres of cereal chromosomes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259100
retrieved
7 July 2018
Nested retrotransposons in the intergenic regions of the maize genome
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259100
retrieved
7 July 2018
Novel gene expression mechanism in a fission yeast retroelement: Tf1 proteins are derived from a single primary translation product
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259100
retrieved
7 July 2018
A novel mechanism of self-primed reverse transcription defines a new family of retroelements
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259100
retrieved
7 July 2018
The chromo superfamily: new members, duplication of the chromo domain and possible role in delivering transcription regulators to chromatin
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259100
retrieved
7 July 2018
A short amino acid sequence able to specify nuclear location
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259100
retrieved
7 July 2018
Genetic applications of an inverse polymerase chain reaction
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259100
retrieved
7 July 2018
Molecular genetic analysis of fission yeast Schizosaccharomyces pombe
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259100
retrieved
7 July 2018
The Arabidopsis LHP1 protein colocalizes with histone H3 Lys27 trimethylation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259100
retrieved
26 October 2018
Different domains control the localization and mobility of LIKE HETEROCHROMATIN PROTEIN1 in Arabidopsis nuclei
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259100
retrieved
26 October 2018
The integrase of the long terminal repeat-retrotransposon tf1 has a chromodomain that modulates integrase activities.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259100
retrieved
26 October 2018
The Sireviruses, a plant-specific lineage of the Ty1/copia retrotransposons, interact with a family of proteins related to dynein light chain 8.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259100
retrieved
26 October 2018
Phylogenomic analysis of chromoviruses
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259100
retrieved
26 October 2018
HP1 is essential for DNA methylation in neurospora
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259100
retrieved
26 October 2018
Target site specificity of the Tos17 retrotransposon shows a preference for insertion within genes and against insertion in retrotransposon-rich regions of the genome.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259100
retrieved
26 October 2018
Methylation of histone H3 in euchromatin of plant chromosomes depends on basic nuclear DNA content
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259100
retrieved
26 October 2018
The genome sequence and structure of rice chromosome 1.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259100
retrieved
26 October 2018
Functional rice centromeres are marked by a satellite repeat and a centromere-specific retrotransposon
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259100
retrieved
26 October 2018
Dependence of heterochromatic histone H3 methylation patterns on the Arabidopsis gene DDM1.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259100
retrieved
26 October 2018
Mutational analysis of the transcription factor IIIB-DNA target of Ty3 retroelement integration
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259100
retrieved
26 October 2018
Mutations in LIKE HETEROCHROMATIN PROTEIN 1 affect flowering time and plant architecture in Arabidopsis.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259100
retrieved
26 October 2018
Retrotransposon-related DNA sequences in the centromeres of grass chromosomes.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259100
retrieved
26 October 2018
The Saccharomyces retrotransposon Ty5 integrates preferentially into regions of silent chromatin at the telomeres and mating loci
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259100
retrieved
26 October 2018
Yeast retrotransposons: finding a nice quiet neighborhood
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/18256242
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Thiamine-repressible expression vectors pREP and pRIP for fission yeast
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/18256242
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Transposon silencing in the Caenorhabditis elegans germ line by natural RNAi
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/18256242
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
A rapid method for the construction of synthetic genes using the polymerase chain reaction
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/18256242
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1101/GR.7146408
1 reference
stated in
Europe PubMed Central
PMC publication ID
2259100
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18256242%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 January 2020
PMC publication ID
2259100
1 reference
stated in
Europe PubMed Central
PMC publication ID
2259100
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18256242%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 January 2020
PubMed publication ID
18256242
1 reference
stated in
Europe PubMed Central
PMC publication ID
2259100
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18256242%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 January 2020
ResearchGate publication ID
5596465
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