(Q34759105)

English

Evolutionary dynamics of West Nile virus in the United States, 1999-2011: phylogeny, selection pressure and evolutionary time-scale analysis

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scholarly article

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Europe PubMed Central

PubMed publication ID

4 August 2017

Evolutionary dynamics of West Nile virus in the United States, 1999-2011: phylogeny, selection pressure and evolutionary time-scale analysis (English)

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Europe PubMed Central

PubMed publication ID

4 August 2017

West Nile virus

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1 reference

based on heuristic

inferred from title

Evolutionary dynamics

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based on heuristic

inferred from title

object named as

Germán Añez

1

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9

object named as

Laura D Kramer

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Europe PubMed Central

PubMed publication ID

4 August 2017

Susan L Stramer

8

object named as

Susan L Stramer

1 reference

Europe PubMed Central

PubMed publication ID

4 August 2017

3

object named as

Caren Chancey

1 reference

Europe PubMed Central

PubMed publication ID

4 August 2017

author name string

Andriyan Grinev

2

1 reference

Europe PubMed Central

PubMed publication ID

4 August 2017

Christopher Ball

4

1 reference

Europe PubMed Central

PubMed publication ID

4 August 2017

Namita Akolkar

5

1 reference

Europe PubMed Central

PubMed publication ID

4 August 2017

Kevin J Land

6

1 reference

Europe PubMed Central

PubMed publication ID

4 August 2017

Valerie Winkelman

7

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Europe PubMed Central

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4 August 2017

Maria Rios

10

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Europe PubMed Central

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4 August 2017

language of work or name

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publication date

30 May 2013

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Europe PubMed Central

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4 August 2017

PLoS Neglected Tropical Diseases

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Europe PubMed Central

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4 August 2017

7

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Europe PubMed Central

PubMed publication ID

4 August 2017

5

1 reference

Europe PubMed Central

PubMed publication ID

4 August 2017

e2245

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Europe PubMed Central

PubMed publication ID

4 August 2017

copyright license

Creative Commons CC0 License

30 May 2013

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April 2022 Public Data File from Crossref

copyright status

copyrighted, dedicated to the public domain by copyright holder

0 references

Unifying the spatial epidemiology and molecular evolution of emerging epidemics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667762

7 July 2018

Detecting individual sites subject to episodic diversifying selection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667762

7 July 2018

Point mutations in the West Nile virus (Flaviviridae; Flavivirus) RNA-dependent RNA polymerase alter viral fitness in a host-dependent manner in vitro and in vivo

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667762

7 July 2018

West Nile virus population genetics and evolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667762

7 July 2018

West Nile fever outbreak in horses and humans, Spain, 2010.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667762

7 July 2018

Human case of autochthonous West Nile virus lineage 2 infection in Italy, September 2011.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667762

7 July 2018

Circulation of different lineages of dengue virus type 2 in Central America, their evolutionary time-scale and selection pressure analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667762

7 July 2018

Molecular evolution of West Nile virus in a northern temperate region: Connecticut, USA 1999-2008

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667762

7 July 2018

A random effects branch-site model for detecting episodic diversifying selection.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667762

7 July 2018

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667762

7 July 2018

Genetic characterization of West Nile virus lineage 2, Greece, 2010.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667762

7 July 2018

Phylogenetic analysis of West Nile virus isolates, Italy, 2008-2009

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667762

7 July 2018

Evolution of new genotype of West Nile virus in North America

1 reference

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7 July 2018

West Nile virus and its emergence in the United States of America

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667762

7 July 2018

Phylogeography of West Nile virus: from the cradle of evolution in Africa to Eurasia, Australia, and the Americas

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667762

7 July 2018

Detection of West Nile virus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667762

7 July 2018

RDP3: a flexible and fast computer program for analyzing recombination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667762

7 July 2018

Datamonkey 2010: a suite of phylogenetic analysis tools for evolutionary biology

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667762

7 July 2018

New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667762

7 July 2018

Multi-year evolutionary dynamics of West Nile virus in suburban Chicago, USA, 2005-2007.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667762

7 July 2018

Evolutionary characterization of the West Nile Virus complete genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667762

7 July 2018

Genetic analysis of West Nile virus isolates from US blood donors during 2002-2005.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667762

7 July 2018

jModelTest: phylogenetic model averaging

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667762

7 July 2018

Genetic Variability of West Nile Virus in US Blood Donors, 2002–2005

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667762

7 July 2018

Fine-scale genetic variation and evolution of West Nile Virus in a transmission "hot spot" in suburban Chicago, USA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667762

7 July 2018

Genetic Determinants of Virulence in Pathogenic Lineage 2 West Nile Virus Strains

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667762

7 July 2018

Multiple recombinant dengue type 1 viruses in an isolate from a dengue patient

1 reference

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7 July 2018

BEAST: Bayesian evolutionary analysis by sampling trees

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667762

7 July 2018

A newly emergent genotype of West Nile virus is transmitted earlier and more efficiently by Culex mosquitoes.

1 reference

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7 July 2018

Selecton 2007: advanced models for detecting positive and purifying selection using a Bayesian inference approach

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667762

7 July 2018

West Nile virus isolates from India: evidence for a distinct genetic lineage.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667762

7 July 2018

Phylogenetic analysis of WNV in North American blood donors during the 2003-2004 epidemic seasons.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667762

7 July 2018

Declining Growth Rate of West Nile Virus in North America

1 reference

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Diversity and evolution of West Nile virus in Illinois and the United States, 2002-2005.

1 reference

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7 July 2018

Adaptation to different human populations by HIV-1 revealed by codon-based analyses

1 reference

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Approximate likelihood-ratio test for branches: A fast, accurate, and powerful alternative

1 reference

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West Nile virus: epidemiology and clinical features of an emerging epidemic in the United States

1 reference

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Novel flavivirus or new lineage of West Nile virus, central Europe

1 reference

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Not so different after all: a comparison of methods for detecting amino acid sites under selection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667762

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Genetic and phenotypic variation of West Nile virus in New York, 2000-2003.

1 reference

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Genetic Variation among Temporally and Geographically Distinct West Nile Virus Isolates, United States, 2001, 2002

1 reference

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1 reference

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MrBayes 3: Bayesian phylogenetic inference under mixed models

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667762

7 July 2018

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667762

7 July 2018

Complete genome sequences and phylogenetic analysis of West Nile virus strains isolated from the United States, Europe, and the Middle East

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667762

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Bayesian selection of continuous-time Markov chain evolutionary models

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667762

7 July 2018

Origin of the West Nile virus responsible for an outbreak of encephalitis in the northeastern United States

1 reference

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Extensive nucleotide changes and deletions within the envelope glycoprotein gene of Euro-African West Nile viruses

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667762

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1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PNTD.0002245

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1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PNTD.0002245

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1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PNTD.0002245

21 January 2018

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1 reference

https://pubmed.ncbi.nlm.nih.gov/23738027

12 December 2020

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10.1371/JOURNAL.PNTD.0002245

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Europe PubMed Central

PubMed publication ID

4 August 2017

PMC publication ID

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Europe PubMed Central

PubMed publication ID

4 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

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4 August 2017

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