(Q34767671)

4 August 2017

An 8 nt RNA triggers a rate-limiting shift of RNA polymerase II complexes into elongation (English)

1 reference

4 August 2017

Aaron R Hieb

1

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4 August 2017

Sean Baran

series ordinal

2

1 reference

4 August 2017

James A Goodrich

series ordinal

3

1 reference

4 August 2017

Jennifer F Kugel

series ordinal

4

1 reference

4 August 2017

language of work or name

English

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publication date

15 June 2006

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4 August 2017

1 reference

4 August 2017

25

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4 August 2017

3100-3109

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4 August 2017

13

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describes a project that uses

4 August 2017

ImageQuant

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC1500975/fullTextXML

inferred from PubMed Central ID database lookup

cites work

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TFIIH operates through an expanded proximal promoter to fine-tune c-myc expression

7 July 2018

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Transcriptional coactivator PC4 stimulates promoter escape and facilitates transcriptional synergy by GAL4-VP16

7 July 2018

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Structural basis of transcription: separation of RNA from DNA by RNA polymerase II

7 July 2018

1 reference

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Structural basis of transcription: an RNA polymerase II-TFIIB cocrystal at 4.5 Angstroms

7 July 2018

1 reference

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The initiation-elongation transition: lateral mobility of RNA in RNA polymerase II complexes is greatly reduced at +8/+9 and absent by +23.

7 July 2018

1 reference

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The RNA polymerase II core promoter

7 July 2018

1 reference

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Promoter escape by RNA polymerase II

7 July 2018

1 reference

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Cooperation between complexes that regulate chromatin structure and transcription

7 July 2018

1 reference

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The regulatory role for the ERCC3 helicase of general transcription factor TFIIH during promoter escape in transcriptional activation

7 July 2018

1 reference

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Translocation after synthesis of a four-nucleotide RNA commits RNA polymerase II to promoter escape

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1500975

Strong natural pausing by RNA polymerase II within 10 bases of transcription start may result in repeated slippage and reextension of the nascent RNA.

7 July 2018

1 reference

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Transcriptional consequences of topoisomerase inhibition

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1500975

Promoter clearance by RNA polymerase II is an extended, multistep process strongly affected by sequence

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1500975

Transcriptional coactivator complexes

7 July 2018

1 reference

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Defective interplay of activators and repressors with TFIH in xeroderma pigmentosum

7 July 2018

1 reference

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The FBP interacting repressor targets TFIIH to inhibit activated transcription

7 July 2018

1 reference

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Transcriptional regulation through Mediator-like coactivators in yeast and metazoan cells

7 July 2018

1 reference

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Mechanism of ATP-dependent promoter melting by transcription factor IIH

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1500975

Promoter-proximal stalling results from the inability to recruit transcription factor IIH to the transcription complex and is a regulated event

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1500975

Promoter escape limits the rate of RNA polymerase II transcription and is enhanced by TFIIE, TFIIH, and ATP on negatively supercoiled DNA

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1500975

Three transitions in the RNA polymerase II transcription complex during initiation

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1500975

Promoter escape by RNA polymerase II. Formation of an escape-competent transcriptional intermediate is a prerequisite for exit of polymerase from the promoter

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1500975

The general transcription factors of RNA polymerase II

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1500975

Opening of an RNA polymerase II promoter occurs in two distinct steps and requires the basal transcription factors IIE and IIH.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1500975

DNA topology and a minimal set of basal factors for transcription by RNA polymerase II

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1500975

Transcription factors IIE and IIH and ATP hydrolysis direct promoter clearance by RNA polymerase II

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1500975

Promoter-proximal pausing of RNA polymerase II defines a general rate-limiting step after transcription initiation

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1500975

Recycling of the general transcription factors during RNA polymerase II transcription

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1500975

Short transcripts of the ternary complex provide insight into RNA polymerase II elongational pausing.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1500975

Abortive initiation by RNA polymerase II in vitro at the adenovirus 2 major late promoter

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1500975

The RNA polymerase II molecule at the 5' end of the uninduced hsp70 gene of D. melanogaster is transcriptionally engaged.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1500975

Transcription initiation by RNA polymerase II in vitro. Properties of preinitiation, initiation, and elongation complexes.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1500975

Dynamic error correction and regulation of downstream bubble opening by human RNA polymerase II.

7 July 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FSJ.EMBOJ.7601197

A kinetic model for the early steps of RNA synthesis by human RNA polymerase II.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FSJ.EMBOJ.7601197

NTP-driven translocation by human RNA polymerase II.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FSJ.EMBOJ.7601197

Identification of a minimal set of proteins that is sufficient for accurate initiation of transcription by RNA polymerase II.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1500975

Distinct roles for the helicases of TFIIH in transcript initiation and promoter escape

26 October 2018

1 reference

12 December 2020

Binding of TFIIB to RNA polymerase II: Mapping the binding site for the TFIIB zinc ribbon domain within the preinitiation complex

1 reference

12 December 2020

Transcription initiation by RNA polymerase II in vitro. At least two nucleotides must be added to form a stable ternary complex

1 reference

12 December 2020

Immunoaffinity purification of the human multisubunit transcription factor IIH

1 reference

12 December 2020

The role of the transcription bubble and TFIIB in promoter clearance by RNA polymerase II

1 reference

12 December 2020

The sequence at specific positions in the early transcribed region sets the rate of transcript synthesis by RNA polymerase II in vitro

1 reference

12 December 2020

A Role for the TFIIH XPB DNA Helicase in Promoter Escape by RNA Polymerase II

1 reference

12 December 2020

The 8-nucleotide-long RNA:DNA hybrid is a primary stability determinant of the RNA polymerase II elongation complex

1 reference

12 December 2020

Identifiers

DOI

10.1038/SJ.EMBOJ.7601197

1 reference

4 August 2017

1 reference

4 August 2017

1 reference