(Q34778439)

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Unsupervised clustering of subcellular protein expression patterns in high-throughput microscopy images reveals protein complexes and functional relationships between proteins

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scholarly article

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Europe PubMed Central

PubMed publication ID

4 August 2017

Unsupervised clustering of subcellular protein expression patterns in high-throughput microscopy images reveals protein complexes and functional relationships between proteins (English)

1 reference

Europe PubMed Central

PubMed publication ID

4 August 2017

Putative serine/threonine protein kinase RTK1 YDL025C

1 reference

GOA release 2020-03-11

unsupervised clustering

1 reference

based on heuristic

inferred from title

author name string

Louis-François Handfield

1

1 reference

Europe PubMed Central

PubMed publication ID

4 August 2017

Yolanda T Chong

2

1 reference

Europe PubMed Central

PubMed publication ID

4 August 2017

Jibril Simmons

3

1 reference

Europe PubMed Central

PubMed publication ID

4 August 2017

Brenda J Andrews

4

1 reference

Europe PubMed Central

PubMed publication ID

4 August 2017

Alan M Moses

5

1 reference

Europe PubMed Central

PubMed publication ID

4 August 2017

publication date

13 June 2013

1 reference

Europe PubMed Central

PubMed publication ID

4 August 2017

PLOS Computational Biology

1 reference

Europe PubMed Central

PubMed publication ID

4 August 2017

9

1 reference

Europe PubMed Central

PubMed publication ID

4 August 2017

6

1 reference

Europe PubMed Central

PubMed publication ID

4 August 2017

e1003085

1 reference

Europe PubMed Central

PubMed publication ID

4 August 2017

copyright license

Creative Commons Attribution 4.0 International

13 June 2013

1 reference

April 2022 Public Data File from Crossref

copyright status

0 references

Dynamic proteomics of human protein level and localization across the cell cycle

1 reference

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Spatial regulation of Cdc55-PP2A by Zds1/Zds2 controls mitotic entry and mitotic exit in budding yeast

1 reference

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7 July 2018

Pattern recognition software and techniques for biological image analysis

1 reference

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7 July 2018

SCFCdc4 enables mating type switching in yeast by cyclin-dependent kinase-mediated elimination of the Ash1 transcriptional repressor.

1 reference

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7 July 2018

Cell cycle dependence of protein subcellular location inferred from static, asynchronous images

1 reference

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7 July 2018

Efficient framework for automated classification of subcellular patterns in budding yeast

1 reference

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The synthetic genetic network around PKC1 identifies novel modulators and components of protein kinase C signaling in Saccharomyces cerevisiae

1 reference

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1 reference

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Automatic image analysis for gene expression patterns of fly embryos

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Fast automated cell phenotype image classification

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Automated subcellular location determination and high-throughput microscopy

1 reference

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1 reference

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7 July 2018

Noise in protein expression scales with natural protein abundance

1 reference

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7 July 2018

Single-cell proteomic analysis of S. cerevisiae reveals the architecture of biological noise

1 reference

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High-dimensional and large-scale phenotyping of yeast mutants.

1 reference

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Object type recognition for automated analysis of protein subcellular location

1 reference

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7 July 2018

Objective clustering of proteins based on subcellular location patterns

1 reference

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7 July 2018

Improved monomeric red, orange and yellow fluorescent proteins derived from Discosoma sp. red fluorescent protein

1 reference

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7 July 2018

CDK activity antagonizes Whi5, an inhibitor of G1/S transcription in yeast

1 reference

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7 July 2018

Java Treeview--extensible visualization of microarray data

1 reference

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7 July 2018

Global mapping of the yeast genetic interaction network

1 reference

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7 July 2018

SCMD: Saccharomyces cerevisiae Morphological Database

1 reference

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Global analysis of protein localization in budding yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681667

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Bud position in Saccharomyces cerevisiae

1 reference

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Ras recruits mitotic exit regulator Lte1 to the bud cortex in budding yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681667

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Nuclear translation: what is the evidence?

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1 reference

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Gene ontology: tool for the unification of biology

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Cluster analysis and display of genome-wide expression patterns

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Comprehensive identification of cell cycle-regulated genes of the yeast Saccharomyces cerevisiae by microarray hybridization

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Automated recognition of patterns characteristic of subcellular structures in fluorescence microscopy images

1 reference

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1 reference

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1 reference

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21 January 2018

Automated image analysis of protein localization in budding yeast

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1003085

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1 reference

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1 reference

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Identifiers

10.1371/JOURNAL.PCBI.1003085

1 reference

Europe PubMed Central

PubMed publication ID

4 August 2017

DBLP publication ID

journals/ploscb/HandfieldCSAM13

1 reference

DBLP Dataset 2021-01-02

28 January 2021

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

4 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

4 August 2017

ResearchGate publication ID

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