(Q34813050)

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Global transcription analysis of Krebs tricarboxylic acid cycle mutants reveals an alternating pattern of gene expression and effects on hypoxic and oxidative genes

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scholarly article

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Europe PubMed Central

4 August 2017

Global transcription analysis of Krebs tricarboxylic acid cycle mutants reveals an alternating pattern of gene expression and effects on hypoxic and oxidative genes (English)

1 reference

Europe PubMed Central

4 August 2017

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author name string

Mark T McCammon

1

1 reference

Europe PubMed Central

4 August 2017

Charles B Epstein

2

1 reference

Europe PubMed Central

4 August 2017

Beata Przybyla-Zawislak

3

1 reference

Europe PubMed Central

4 August 2017

Lee McAlister-Henn

4

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Europe PubMed Central

4 August 2017

Ronald A Butow

5

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Europe PubMed Central

4 August 2017

language of work or name

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publication date

1 March 2003

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Europe PubMed Central

4 August 2017

Molecular Biology of the Cell

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Europe PubMed Central

4 August 2017

14

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Europe PubMed Central

4 August 2017

958-972

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Europe PubMed Central

4 August 2017

3

1 reference

Europe PubMed Central

4 August 2017

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1 reference

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Cellular responses to mitochondrial dysfunction: it's not always downhill

1 reference

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A microarray-assisted screen for potential Hap1 and Rox1 target genes in Saccharomyces cerevisiae

1 reference

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The TOR-controlled transcription activators GLN3, RTG1, and RTG3 are regulated in response to intracellular levels of glutamine

1 reference

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Germline mutations in FH predispose to dominantly inherited uterine fibroids, skin leiomyomata and papillary renal cell cancer

1 reference

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RTG-dependent mitochondria to nucleus signaling is negatively regulated by the seven WD-repeat protein Lst8p

1 reference

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Genomic analyses of anaerobically induced genes in Saccharomyces cerevisiae: functional roles of Rox1 and other factors in mediating the anoxic response.

1 reference

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Gene mutations in the succinate dehydrogenase subunit SDHB cause susceptibility to familial pheochromocytoma and to familial paraganglioma

1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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Genome-wide responses to mitochondrial dysfunction

1 reference

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1 reference

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The Saccharomyces cerevisiae ICL2 gene encodes a mitochondrial 2-methylisocitrate lyase involved in propionyl-coenzyme A metabolism.

1 reference

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Mechanism of metabolic control. Target of rapamycin signaling links nitrogen quality to the activity of the Rtg1 and Rtg3 transcription factors

1 reference

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8 July 2018

The transcriptional activator Cat8p provides a major contribution to the reprogramming of carbon metabolism during the diauxic shift in Saccharomyces cerevisiae

1 reference

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8 July 2018

In organello formaldehyde crosslinking of proteins to mtDNA: identification of bifunctional proteins

1 reference

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8 July 2018

Maintenance and integrity of the mitochondrial genome: a plethora of nuclear genes in the budding yeast

1 reference

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8 July 2018

Mutations in SDHD, a mitochondrial complex II gene, in hereditary paraganglioma

1 reference

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8 July 2018

Cat8p, the activator of gluconeogenic genes in Saccharomyces cerevisiae, regulates carbon source-dependent expression of NADP-dependent cytosolic isocitrate dehydrogenase (Idp2p) and lactate permease (Jen1p).

1 reference

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8 July 2018

Rapamycin-modulated transcription defines the subset of nutrient-sensitive signaling pathways directly controlled by the Tor proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=151572

8 July 2018

Genome-wide transcriptional analysis of aerobic and anaerobic chemostat cultures of Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=151572

8 July 2018

A transcriptional switch in the expression of yeast tricarboxylic acid cycle genes in response to a reduction or loss of respiratory function

1 reference

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Functional characterization of the S. cerevisiae genome by gene deletion and parallel analysis

1 reference

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Genetic and biochemical interactions involving tricarboxylic acid cycle (TCA) function using a collection of mutants defective in all TCA cycle genes.

1 reference

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Moonlighting proteins.

1 reference

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8 July 2018

Genes of succinyl-CoA ligase from Saccharomyces cerevisiae.

1 reference

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Genetic instabilities in human cancers

1 reference

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Cluster analysis and display of genome-wide expression patterns

1 reference

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Sources of NADPH and expression of mammalian NADP+-specific isocitrate dehydrogenases in Saccharomyces cerevisiae.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=151572

8 July 2018

Oxygen sensing and the transcriptional regulation of oxygen-responsive genes in yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=151572

8 July 2018

Exploring the metabolic and genetic control of gene expression on a genomic scale

1 reference

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Inborn errors of the Krebs cycle: a group of unusual mitochondrial diseases in human

1 reference

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Molecular genetics of yeast TCA cycle isozymes

1 reference

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Variations of the C2H2 zinc finger motif in the yeast genome and classification of yeast zinc finger proteins.

1 reference

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The CIT3 gene of Saccharomyces cerevisiae encodes a second mitochondrial isoform of citrate synthase

1 reference

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Pyruvate metabolism in Saccharomyces cerevisiae

1 reference

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Approaches to the study of Rox1 repression of the hypoxic genes in the yeast Saccharomyces cerevisiae

1 reference

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Mutants of Saccharomyces cerevisiae with defects in acetate metabolism: isolation and characterization of Acn- mutants.

1 reference

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1 reference

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8 July 2018

Global regulation of mitochondrial biogenesis in Saccharomyces cerevisiae.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=151572

8 July 2018

Enzymes as RNA-binding proteins: a role for (di)nucleotide-binding domains?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=151572

8 July 2018

Yeast mitochondrial NAD(+)-dependent isocitrate dehydrogenase is an RNA-binding protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=151572

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Genetics of the synthesis of serine from glycine and the utilization of glycine as sole nitrogen source by Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=151572

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A ten-minute DNA preparation from yeast efficiently releases autonomous plasmids for transformation of Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=151572

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Communication between mitochondria and the nucleus in regulation of cytochrome genes in the yeast Saccharomyces cerevisiae

1 reference

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Association of glyoxylate and beta-oxidation enzymes with peroxisomes of Saccharomyces cerevisiae

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1 reference

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8 July 2018

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=151572

8 July 2018

Improved method for high efficiency transformation of intact yeast cells

1 reference

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=151572

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=151572

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Antioxidant function of cytosolic sources of NADPH in yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=151572

26 October 2018

Mutations in SDHC cause autosomal dominant paraganglioma, type 3.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=151572

26 October 2018

Interorganellar communication. Altered nuclear gene expression profiles in a yeast mitochondrial dna mutant.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=151572

26 October 2018

Increased synthesis and decreased stability of mitochondrial translation products in yeast as a result of loss of mitochondrial (NAD(+))-dependent isocitrate dehydrogenase.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=151572

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Widespread aneuploidy revealed by DNA microarray expression profiling.

1 reference

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An unassembled subunit of NAD(+)-dependent isocitrate dehydrogenase is insoluble and covalently modified.

1 reference

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26 October 2018

Molecular genetics of succinate:quinone oxidoreductase in eukaryotes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=151572

26 October 2018

Saccharomyces cerevisiae PAU genes are induced by anaerobiosis

1 reference

https://pubmed.ncbi.nlm.nih.gov/12631716

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Allosteric inhibition of NAD+-specific isocitrate dehydrogenase by a mitochondrial mRNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/12631716

12 December 2020

based on heuristic

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Tricarboxylic acid cycle in rat brain synaptosomes. Fluxes and interactions with aspartate aminotransferase and malate/aspartate shuttle

1 reference

https://pubmed.ncbi.nlm.nih.gov/12631716

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mutations in the IDH2 gene encoding the catalytic subunit of the yeast NAD+-dependent isocitrate dehydrogenase can be suppressed by mutations in the CIT1 gene encoding citrate synthase and other genes of oxidative metabolism

1 reference

https://pubmed.ncbi.nlm.nih.gov/12631716

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Affinity purification and kinetic analysis of mutant forms of yeast NAD+-specific isocitrate dehydrogenase

1 reference

https://pubmed.ncbi.nlm.nih.gov/12631716

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1091/MBC.E02-07-0422

1 reference

Europe PubMed Central

4 August 2017

1 reference

Europe PubMed Central

4 August 2017

1 reference

Europe PubMed Central

4 August 2017

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