(Q34830313)

4 August 2017

1 reference

title

Challenges and rewards of interaction proteomics (English)

1 reference

4 August 2017

1

Shoshana J Wodak

0 references

Bertrand Séraphin

object named as

Bertrand Séraphin

series ordinal

4

0 references

James Vlasblom

series ordinal

3

object named as

James Vlasblom

1 reference

4 August 2017

Shuye Pu

2

1 reference

4 August 2017

publication date

17 September 2008

1 reference

Molecular & Cellular Proteomics

4 August 2017

published in

1 reference

4 August 2017

volume

8

1 reference

4 August 2017

issue

1

1 reference

4 August 2017

page(s)

3-18

1 reference

The cell as a collection of protein machines: preparing the next generation of molecular biologists

4 August 2017

cites work

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Using protein affinity chromatography to probe structure of protein machines.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Functional organization of the yeast proteome by systematic analysis of protein complexes

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

A comprehensive two-hybrid analysis to explore the yeast protein interactome

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Proteome survey reveals modularity of the yeast cell machinery

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Global landscape of protein complexes in the yeast Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Interaction network containing conserved and essential protein complexes in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

A protein interaction map of Drosophila melanogaster

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

A map of the interactome network of the metazoan C. elegans

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Large-scale mapping of human protein-protein interactions by mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Towards a proteome-scale map of the human protein–protein interaction network

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

A human protein-protein interaction network: a resource for annotating the proteome

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Assigning protein functions by comparative genome analysis: Protein phylogenetic profiles

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

The phylogenetic extent of metabolic enzymes and pathways

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

The multiplicity of domains in proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Toward a comprehensive atlas of the physical interactome of Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Identifying functional modules in the physical interactome of Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

The biological impact of mass-spectrometry-based proteomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

The elusive yeast interactome

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

The spliceosome: caught in a web of shifting interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

BioGRID: a general repository for interaction datasets

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

The yeast splicing factor Mud13p is a commitment complex component and corresponds to CBP20, the small subunit of the nuclear cap-binding complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

A nuclear cap binding protein complex involved in pre-mRNA splicing

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

A yeast cap binding protein complex (yCBC) acts at an early step in pre-mRNA splicing.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Rad4-Rad23 interaction with SWI/SNF links ATP-dependent chromatin remodeling with nucleotide excision repair

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Ethidium bromide provides a simple tool for identifying genuine DNA-independent protein associations

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Evidence for direct protein-protein interaction between members of the enterobacterial Hha/YmoA and H-NS families of proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Evaluation of clustering algorithms for protein-protein interaction networks

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

A high-accuracy consensus map of yeast protein complexes reveals modular nature of gene essentiality.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

An efficient algorithm for large-scale detection of protein families

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Dynamic Complex Formation During the Yeast Cell Cycle

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Evidence for dynamically organized modularity in the yeast protein-protein interaction network

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Transcriptional regulation of protein complexes in yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

How complete are current yeast and human protein-interaction networks?

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

High-quality binary protein interaction map of the yeast interactome network

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Mapping biochemical networks with protein-fragment complementation assays

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Design and application of a cytokine-receptor-based interaction trap

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Protein interactions: two methods for assessment of the reliability of high throughput observations

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Inferring domain-domain interactions from protein-protein interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Making the most of high-throughput protein-interaction data

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Protein-protein interaction networks and biology--what's the connection?

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Where have all the interactions gone? Estimating the coverage of two-hybrid protein interaction maps

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Estimating the size of the human interactome

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

A Bayesian Networks Approach for Predicting Protein-Protein Interactions from Genomic Data

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

STRING: known and predicted protein-protein associations, integrated and transferred across organisms

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Comprehensive curation and analysis of global interaction networks in Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

An in vivo map of the yeast protein interactome

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Quantitative proteomics reveals regulation of dynamic components within TATA-binding protein (TBP) transcription complexes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Confirmation of organized modularity in the yeast interactome

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Still stratus not altocumulus: further evidence against the date/party hub distinction

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Stratus not altocumulus: a new view of the yeast protein interaction network

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Relating three-dimensional structures to protein networks provides evolutionary insights

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Protein-protein interfaces: mimics and inhibitors

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

On the origin and highly likely completeness of single-domain protein structures.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Completeness in structural genomics.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Structure-based assembly of protein complexes in yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Stoichiometry of the peripheral stalk subunits E and G of yeast V1-ATPase determined by mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

The yeast Ski complex is a hetero-tetramer

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Native protein mass spectrometry: from intact oligomers to functional machineries.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Modeling of protein binary complexes using structural mass spectrometry data

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Docking and scoring protein complexes: CAPRI 3rd Edition

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Determining the architectures of macromolecular assemblies

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

The molecular sociology of the cell

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Cryo-electron tomography reveals the cytoskeletal structure of Spiroplasma melliferum

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

SmartCell, a framework to simulate cellular processes that combines stochastic approximation with diffusion and localisation: analysis of simple networks.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

A new, tenth subunit of TFIIH is responsible for the DNA repair syndrome trichothiodystrophy group A

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Identification of TFB5, a new component of general transcription and DNA repair factor IIH.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Proteomic analysis identifies a new complex required for nuclear pre-mRNA retention and splicing

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Cytoscape: a software environment for integrated models of biomolecular interaction networks

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

SGD: Saccharomyces Genome Database

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

MIPS: a database for genomes and protein sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Predicting co-complexed protein pairs using genomic and proteomic data integration

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

DIP, the Database of Interacting Proteins: a research tool for studying cellular networks of protein interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Gene ontology: tool for the unification of biology

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Global analysis of protein localization in budding yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Subcellular localization of the yeast proteome

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Genomic expression programs in the response of yeast cells to environmental changes

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

STRING 7--recent developments in the integration and prediction of protein interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

IntAct--open source resource for molecular interaction data

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

BIND: the Biomolecular Interaction Network Database

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Expanded protein information at SGD: new pages and proteome browser.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Global mapping of the yeast genetic interaction network

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

The mouse genome database (MGD): new features facilitating a model system

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

WormBase: new content and better access

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

FlyBase: genomes by the dozen

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Development of human protein reference database as an initial platform for approaching systems biology in humans

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

MPact: the MIPS protein interaction resource on yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

The HUPO PSI's molecular interaction format--a community standard for the representation of protein interaction data

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

The minimum information required for reporting a molecular interaction experiment (MIMIx).

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

WI-PHI: a weighted yeast interactome enriched for direct physical interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

Protein interactions: is seeing believing?

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.R800014-MCP200

10.1074/MCP.R800014-MCP200

21 January 2018

Identifiers

DOI

1 reference

4 August 2017

1 reference