(Q34842519)

4 August 2017

title

Physical protein-protein interactions predicted from microarrays (English)

1 reference

protein-protein interaction

4 August 2017

main subject

1 reference

3

Burkhard Rost

1 reference

4 August 2017

Ta-Tsen Soong

1

1 reference

4 August 2017

Kazimierz O Wrzeszczynski

series ordinal

2

1 reference

4 August 2017

language of work or name

English

0 references

publication date

1 October 2008

1 reference

4 August 2017

1 reference

4 August 2017

volume

24

1 reference

4 August 2017

issue

22

1 reference

4 August 2017

page(s)

2608-2614

1 reference

KEGG for linking genomes to life and the environment

4 August 2017

cites work

1 reference

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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Ratcheting mRNA out of the nucleus

8 July 2018

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Modularity and dynamics of cellular networks

8 July 2018

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8 July 2018

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8 July 2018

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Protein-protein interactions more conserved within species than across species

8 July 2018

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Functions and metabolism of sphingolipids in Saccharomyces cerevisiae

8 July 2018

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8 July 2018

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Choosing negative examples for the prediction of protein-protein interactions

8 July 2018

1 reference

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8 July 2018

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8 July 2018

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Proteome survey reveals modularity of the yeast cell machinery

8 July 2018

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8 July 2018

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Exploration of the function and organization of the yeast early secretory pathway through an epistatic miniarray profile

8 July 2018

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Beyond annotation transfer by homology: novel protein-function prediction methods to assist drug discovery

8 July 2018

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8 July 2018

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Protein-protein interactions in human disease

8 July 2018

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Global analysis of Pub1p targets reveals a coordinate control of gene expression through modulation of binding and stability

8 July 2018

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Kernel methods for predicting protein-protein interactions

8 July 2018

1 reference

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PROFcon: novel prediction of long-range contacts.

8 July 2018

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Mimicking cellular sorting improves prediction of subcellular localization

8 July 2018

1 reference

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Dynamic Complex Formation During the Yeast Cell Cycle

8 July 2018

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NCBI GEO: mining millions of expression profiles--database and tools

8 July 2018

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8 July 2018

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Analyzing protein function on a genomic scale: the importance of gold-standard positives and negatives for network prediction

8 July 2018

1 reference

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The FACT chromatin modulator: genetic and structure/function relationships

8 July 2018

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Evidence for dynamically organized modularity in the yeast protein-protein interaction network

8 July 2018

1 reference

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

1 reference

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8 July 2018

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A Bayesian Networks Approach for Predicting Protein-Protein Interactions from Genomic Data

8 July 2018

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Global analysis of protein expression in yeast

8 July 2018

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Discovering molecular pathways from protein interaction and gene expression data

8 July 2018

1 reference

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Predicting protein function from protein/protein interaction data: a probabilistic approach

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579715

Investigating semantic similarity measures across the Gene Ontology: the relationship between sequence and annotation

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579715

Module networks: identifying regulatory modules and their condition-specific regulators from gene expression data

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579715

An automated method for finding molecular complexes in large protein interaction networks

8 July 2018

1 reference

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8 July 2018

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8 July 2018

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MULTIPROSPECTOR: an algorithm for the prediction of protein-protein interactions by multimeric threading

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579715

Analyzing yeast protein-protein interaction data obtained from different sources

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579715

Protein interactions: two methods for assessment of the reliability of high throughput observations

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579715

Learning gene functional classifications from multiple data types

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579715

Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry

8 July 2018

1 reference

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Relating whole-genome expression data with protein-protein interactions

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579715

8 July 2018

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Missing value estimation methods for DNA microarrays

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579715

Deletion of yeast p24 genes activates the unfolded protein response

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579715

A comprehensive two-hybrid analysis to explore the yeast protein interactome

8 July 2018

1 reference

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The Stanford Microarray Database

8 July 2018

1 reference

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A network of protein-protein interactions in yeast

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579715

A novel Golgi membrane protein is part of a GTPase-binding protein complex involved in vesicle targeting

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579715

Singular value decomposition for genome-wide expression data processing and modeling

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579715

Gene ontology: tool for the unification of biology

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579715

Normalization strategies for cDNA microarrays

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579715

A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579715

Assigning protein functions by comparative genome analysis: Protein phylogenetic profiles

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579715

ELO2 and ELO3, homologues of the Saccharomyces cerevisiae ELO1 gene, function in fatty acid elongation and are required for sphingolipid formation

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579715

Computational discovery of gene modules and regulatory networks

8 July 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTN498

Correlation between gene expression profiles and protein-protein interactions within and across genomes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTN498

Reverse engineering gene regulatory networks.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTN498

Linear modes of gene expression determined by independent component analysis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTN498

CHOP proteins into structural domain-like fragments

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTN498

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTN498

Genome-wide discovery of transcriptional modules from DNA sequence and gene expression.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTN498

A Mathematical Theory of Communication

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTN498

Protein interaction maps on the fly.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTN498

Cataloging proteins in cell cycle control.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579715

Probabilistic model of the human protein-protein interaction network

26 October 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTN498

Protein complexes take the bait

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTN498

The Glc7p nuclear phosphatase promotes mRNA export by facilitating association of Mex67p with mRNA

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18829707

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/BIOINFORMATICS/BTN498

1 reference

journals/bioinformatics/SoongWR08

4 August 2017

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

4 August 2017

1 reference